Siniperca chuatsi (mandarin fish): 122863835
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Entry
122863835 CDS
T08948
Symbol
ext1b
Name
(RefSeq) exostosin-1b
KO
K02366
glucuronyl/N-acetylglucosaminyl transferase EXT1 [EC:
2.4.1.224
2.4.1.225
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
schu01100
Metabolic pathways
Module
schu_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
122863835 (ext1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
schu01003
]
122863835 (ext1b)
Enzymes [BR:
schu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
122863835 (ext1b)
2.4.1.225 N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase
122863835 (ext1b)
Glycosyltransferases [BR:
schu01003
]
Glycan extension
O-Glycan
122863835 (ext1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_64
Exostosin_GT47
RXYLT1_C
Motif
Other DBs
NCBI-GeneID:
122863835
NCBI-ProteinID:
XP_044026556
LinkDB
All DBs
Position
LG17:9364246..9488598
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AA seq
740 aa
AA seq
DB search
MQAKKRYLILLSAGACLVLLFYLGGVQLPAASRSRHDRSRNGYRPDQPWPHFSDPLHLFL
PWDQTDTEEYNLHISPRQKRDVNTSVYKGKRCRMDSCFDFSLCQKNGFKVYVYPQQKGEK
ISDSYQNILSTIEGSRFYTSDPGQACLFVLSLDTLDRDQLSPQYVHNLKTKVQNLPLWND
GRNHLIFNLYSGTWPDYTEDLGFDIGQAMLAKASISTENFRPNFDVSIPLFSKEHPRTGG
ERGYLKYNSIPPFRKYMLVFKGKRYLTGIGSDTRNALHHVHNAEDVVLLTTCKHGKDWQK
HKDARCDKDNAEYDKYDYKEMLHNSTFCLVPRGRRLGSFRFLEALQAACVPVMLSNGWEL
PFSEIIDWNTAAVIGDERLLLQIPTTVRSIHQDKILSLRQQTQFLWEAYFSSVEKIVLTT
LEIIQDRVLEHGSRSSLMWNSHPGGLFALPQYSGYLGDFPFYYATLGIKPYPKFTAVIHA
VSPLVSQSQPILKLLVAVAKSQYCAQIIVLWNCDKPLPAKHRWPATSVPVIVIEGENKVM
SSRFLPYETIVTDAVLSLDEDTVLSTTEVDFAFTVWQSFPERIVGYPARSHFWDSNKERW
GYTSKWTNDYSMVLTGAAIYHRYYHYLYTNYLPTSLKSMVDQLANCEDILMNILVSAVTK
LPPIKVTQKKQYKETMMGQSSRASRWADPDHFAQRQTCMNKFASWFGAMPLVHSQMRLDP
VLFKDQVSILRKKYRDIERL
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccaaaaaacgctacctgatcctgctctccgccggtgcatgtctagtgcttctc
ttctacctcggaggggttcagcttccagcggcgagcaggagccggcatgaccgcagccga
aatgggtaccggcccgaccaaccctggcctcacttctcggaccctttacacctcttcctc
ccctgggatcagacggacaccgaggagtacaacctgcacatatctccgaggcagaagagg
gacgtcaacacgagtgtttacaaaggcaaacggtgccgcatggactcatgctttgatttc
tctctgtgtcaaaagaacggattcaaagtttacgtttacccgcagcagaagggggagaag
atctcagatagttatcagaatattttatcgaccattgaagggtccaggttttacacctca
gaccccggacaggcatgtctgttcgtcctaagtctggacactctggaccgggaccagctg
tccccgcaatacgtccacaacctgaagaccaaggtccagaacctgcctctgtggaacgac
ggcaggaaccacctcatatttaacttgtactcggggacgtggccggactatacggaagac
ttgggctttgacatcggtcaggccatgttggccaaagccagcatcagcaccgagaacttc
aggcccaacttcgacgtatccatccccctcttctccaaggagcacccgaggaccggcgga
gagagggggtacctcaagtacaactccatcccgccttttagaaaatacatgctggtgttc
aaggggaagcgctacctgacaggtatcggctcggacaccaggaatgccttacatcacgtc
cacaacgcagaggatgtggtgctgctcaccacctgcaagcatggcaaagactggcagaag
cacaaggacgcacgctgtgacaaggacaacgcagagtatgacaagtacgactataaggag
atgctccacaactccaccttctgtttggtgccccgcggcagacgactgggctcttttcgc
ttcttagaggcgctgcaggctgcgtgtgtgccggtgatgctgagtaacggatgggagctg
cctttctccgagatcatcgactggaacacagccgcagtcatcggcgacgagaggctcctg
ctgcagattccaaccacagtgcgctccatccaccaggataagatcctgtccctcaggcag
cagactcagttcctgtgggaggcctacttctcctccgtggaaaagatagtgctgaccaca
ctggagatcatccaggaccgcgtgttggaacacggctccaggagcagcctgatgtggaac
agtcaccctgggggactcttcgccctgcctcagtactctggatacctgggagacttcccc
ttctactacgccacactgggtattaaaccgtaccccaagttcacagcggtcatccatgct
gtttcccctctggtgtcccagtcccagcccatactcaagctcctggtagctgtggccaag
tcccagtactgtgcacagatcattgtcctgtggaactgtgacaagcctctccctgctaag
caccgctggcctgccacctcagtgcccgtcatcgtcatcgagggagaaaataaggtgatg
agcagtcgtttcttgccctacgagacgatagtgaccgatgctgtcctcagcctggatgaa
gacacagtgctgtccaccacagaggtggactttgccttcaccgtctggcagagttttcca
gagcgaatcgtaggttaccccgctcgtagtcacttctgggacagcaacaaggagcgttgg
ggctacacatccaaatggaccaacgattattcgatggtgctgactggggccgccatctac
cacaggtattaccactacctgtacaccaactacttacccacaagtctgaagagcatggtg
gaccagctggccaactgtgaggacatcctgatgaacatcctggtctctgctgtcaccaag
ctgccgcccatcaaggtcacgcagaagaaacagtacaaggagaccatgatgggacagtct
tcgagggcttctcgctgggccgatccggaccactttgcccagcggcaaacctgcatgaac
aagttcgccagctggtttggcgccatgccgctggtccactcgcagatgagactggaccct
gtcctgttcaaggaccaggtctccattctccgcaagaaatacagggacatcgagaggctc
tga
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