Siniperca chuatsi (mandarin fish): 122877005
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Entry
122877005 CDS
T08948
Symbol
ttc37
Name
(RefSeq) tetratricopeptide repeat protein 37 isoform X1
KO
K12600
superkiller protein 3
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122877005 (ttc37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schu03019
]
122877005 (ttc37)
Messenger RNA biogenesis [BR:
schu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
122877005 (ttc37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_14
TPR_16
TPR_17
TPR_11
TPR_8
TPR_12
TPR_CcmH_CycH
TPR_9
ANAPC3
PPTA
PknG_TPR
Fis1_TPR_C
ARM_TT21_C
TPR_15
YceG_bac
Motif
Other DBs
NCBI-GeneID:
122877005
NCBI-ProteinID:
XP_044054000
LinkDB
All DBs
Position
LG5:15313169..15329905
Genome browser
AA seq
1570 aa
AA seq
DB search
MSNKEVKTALKSAKEAIKNKEFKEALKHCKAVLKLEKNNYNAWVFIGLAASELEQPDQAQ
TAYKKAVELEPEQLLAWQGLANLYEKTDQWDFKVELPNVYEKLVELYASSAKNKCYEIIR
KLSDIYQSDKEYLKLAKVWLHLLQLKEEEAVDKKELLQLWQQMTQLLSDCLNEEEQENET
QQHLITAFEKTMVLVDPVPGEEHKKLSADYVKCLSKLPQEEAKMKEACESMLSLYPNQSY
PLEVLCSHYLKTGVQNEDAVSCFSRLLGLAPYSGLGHLGLGTKALQEGRFKDAIKDLAQG
LKKMSSSTGWYSLAEAQFKMHRYSDSAISCSQGLTVCVSGDKELRVKLLRLKLEALVRSG
GEKAADPALETFSQIPDAEKDPVLVALKGRAYLNKGEVDQALKVSSELVASNPNLAQGLA
LRGLAQLAHDQQQLAEESFLKAASQSPGCGEYYSLLGRLYWDMGEETRKDRSKAHTHLLK
AAKLDPHLGCVFRYLGHYYREVANDHGRARGCYKKAFELDNNDAESGAASVDLSMEQDDM
DTALAILQSVIEKATPGSAKWAWMRRGLYYLKVGEHQQATADLQAALRADPGDWVCWECL
GEAYLNRRSFTAALKAFGKAHQLQPSSIYSVYQAAAIKQILGKFKEAVAEYLQITAQQDY
VPALKGLGECQLSLAKSLMEDCRDGGAIDLIQQAIQNLFRAVELRPDLSCLWKLLGDACT
AVSTVSPNRARVLVPALLAGLDPNTQSHPLNQAQTLKVGERCYARALKLMSEVPSLWYDL
GLNYYRQSSLPCSREGEQNSPSLLLEKAQQCLKKAIMMDSGNHSCWNALGVISMSKGLEK
FALAQHCFIKSIQVEPNNVVAWTNLGSLYLKKDNIELAHEAFKIAQSLEPLYVNCWIGQA
LIAERVGSYDTMDLFRHTTELSTHMEGVKGYAYWVCSTLLDKSNRDSELYRYNIVQMNAI
SAAQVALSKYTERIQSDPDAFIMLGYLNEHLQLKRQALHAYQRAVELLQSMSLTEELAFA
LGSYGRALCTSGQWEEAVHVYNSTPLQELSDLVGLALAYCRAGLIPESINAYERALAVAS
GEKEKAYILTALALLQHRQGNIDSAKTLLFKCSMLKEPISESLLCLCALGLVHSDATLSA
AALTELLKQGSASRNVIEQRCLLTCALLALQGNYSAVQREASRAVHSNPGNPSLWALLSR
LVPQYYPRKANGGAMAGHVACLSSMTQGKRALLYSGVNQLASGRHSGEDSHRNALKTMQR
ALLLCPDDPATWAGLMAACHTENTSCYLSGSAPCRQGLEQILMSVVSEKVRSVEEMERPL
AQTLEAWVLQQAVTGLTLGGRLEQAEALCSQVLNVSPEHPAVMLSLRQVQCQRLLVANGG
TVLPDSVLEQLNSTVMVNPTNLGAWHWLAEVYRSQGLLVQAVMAYRQSLQVASQLGLHSS
QVASLLRLALLALGPLMAGVPGNDWTTLILEATAEVLKLGSSPMALLFQALLQYVTKMAA
RETRRLLEKLVYAPSQDFPVTVVQVASWYLLRHLHAKNDQELMNVLLQHAKMNGDQRLLE
FHSLLASTSS
NT seq
4713 nt
NT seq
+upstream
nt +downstream
nt
atgtctaataaagaagtaaaaacagcattgaaaagtgccaaagaggccataaaaaacaaa
gagttcaaagaggctctaaaacactgcaaggctgttttgaaacttgagaaaaacaattat
aatgcctgggtattcatcggcttggcagccagtgaactcgagcaaccagatcaggcacag
acagcatataaaaaggctgtggagctggagcctgagcagctactggcatggcagggcttg
gcaaatctttatgagaagactgatcagtgggattttaaagtcgagctacctaacgtctat
gagaagcttgttgagctgtatgcaagctctgccaaaaataaatgttatgagattatcaga
aagctctcagatatttatcagtctgataaagaatatttaaagctggcaaaggtttggctg
catctccttcagctgaaggaggaagaggctgtggacaagaaagagttactgcagctatgg
caacagatgacccaactcctctcagactgccttaatgaggaagagcaggaaaatgaaact
caacagcatttaatcacagcatttgagaagaccatggttctcgtggatcctgtaccagga
gaggaacacaagaagctctcagctgactatgtcaaatgtctttctaaactgccacaagaa
gaagccaaaatgaaagaggcatgtgagtccatgctgtccctgtaccccaaccaaagttat
cctcttgaagtcctttgttctcactacctcaaaacaggtgttcagaatgaggatgcagtc
agctgtttctcccggctcctgggtctggccccttacagtggattaggtcacttgggtctg
ggcaccaaagcactgcaagaaggaagatttaaagatgccattaaggaccttgcacaaggg
ttgaagaaaatgagctccagtacaggatggtacagtctggctgaagctcagtttaaaatg
cacagatactcagatagtgctatatcatgctcccaaggtctgacagtgtgtgtttctggg
gacaaggagctaagggtcaaactgctaaggctgaaactagaggctttagtcaggagtgga
ggagagaaggctgcagatccagctttggagacattttcacagatcccagacgctgaaaaa
gacccagttctagtagcccttaaaggacgtgcataccttaacaagggagaagttgatcaa
gcacttaaggtgtcatcagagctggtggcctctaaccctaacctggcccagggcttggca
ctgagagggctggcacaattggctcatgaccagcagcagctggcagaggagagtttccta
aaggcagctagccagagcccaggctgtggagagtattattccctgctgggacgactctac
tgggacatgggagaagagacccgtaaagaccggagcaaagcccatacacatttgctcaag
gctgcaaagttagacccacaccttggttgtgtatttcgctaccttggacattattaccga
gaggtggcaaatgatcatggccgggcacgaggctgctataagaaggcgtttgagttggac
aacaatgatgctgagtctggagctgcctcagtggatctcagtatggagcaggacgatatg
gacactgccttagcaatacttcagtcagtgattgagaaagccactccaggctcagctaaa
tgggcttggatgagacgagggctgtactatctgaaggttggcgagcatcaacaagctact
gctgatctacaggcagctctgagagcagacccaggggactgggtgtgttgggagtgttta
ggtgaggcctacttaaaccgccggagctttacagcagccctgaaggcctttggtaaagcc
catcagcttcaaccctcctccatctacagtgtctatcaggctgctgctatcaaacagatc
ctgggaaagttcaaggaggcagttgcagagtacttgcagatcacagcgcagcaggactat
gttcctgctcttaaaggtcttggggagtgccagctgtctctggcaaaaagtttaatggaa
gactgcagagatggcggagccattgacctcattcagcaagccatacagaacctcttcaga
gctgtggagctgcgtccagacctgtcctgtttgtggaagttgctaggagatgcttgcact
gcagtcagtaccgtgtcaccaaacagagcccgggttctagtgcccgccctgttggctggt
ttagaccctaacacccagagccatcctctgaaccaggcccagacactcaaagtcggtgag
aggtgttatgcccgtgctttgaagctgatgtctgaggtccccagcctttggtatgaccta
ggactcaactattaccgccaatccagcctaccctgctctagagagggagaacagaactcc
ccatctctgctcctagagaaggcccagcagtgtttaaaaaaggctatcatgatggacagt
gggaaccatagctgctggaatgccttgggagtgatttccatgagcaaaggtcttgagaag
ttcgctttggctcaacattgcttcatcaagtccatacaagttgaaccaaataatgtcgtt
gcttggaccaacctcggtagcctgtatttgaagaaggacaatatagagcttgcacacgag
gccttcaagattgcccagtccctggagccactttatgtcaactgctggatcggacaggcg
ctgatagcagagagagtgggaagctatgacaccatggatcttttcaggcacaccactgaa
ctcagcacacatatggagggggtgaaaggttatgcctactgggtgtgttccaccctgctg
gataaaagcaacagagactctgaactgtaccgctacaacatagtccagatgaacgccatc
tctgctgctcaggtggcactcagcaagtacacagagaggatccagtctgaccctgatgcc
ttcattatgcttggctacctgaatgagcacctgcagctgaagaggcaggccttacatgct
taccaaagagctgttgaactgcttcagtccatgtccttgacagaagagctggcttttgct
ctgggcagctatggccgtgctttgtgcacctcgggccagtgggaggaagcggtgcatgtc
tataattccactccactgcaggagcttagtgatctggttgggctggctctggcctactgc
agggcaggactcatcccagagagcattaacgcctatgaacgtgccttggctgtggcttcc
ggtgagaaggagaaggcttacatcttgacagctctggccctgcttcagcaccggcagggt
aacatagactcagccaagactctgctgtttaaatgctcgatgttaaaggagccaatctca
gagtctctgctgtgtttatgtgccctgggattggtccacagtgatgctacactatctgct
gctgccctgactgagctgctgaagcaaggttcagcctctaggaatgttatagagcaacga
tgtctactcacctgcgccttgctggccctgcagggcaactacagtgcagtgcaaagagag
gcttccagagctgtacacagtaatcctggaaacccatctctgtgggccctactgtccaga
ctggtaccacaatactaccccaggaaggcaaatggcggagcgatggctggtcatgttgcc
tgtctctccagtatgacccaaggaaagagggcgttgttgtacagtggagtaaaccagctg
gctagtgggagacactctggagaggacagtcacaggaatgcactgaagactatgcagaga
gctttgctgctctgtcctgatgatccagcaacatgggctggattaatggctgcctgtcac
acagaaaacacttcctgttacctttcaggttctgctccttgcagacaaggattggagcaa
atccttatgtcggtggtttctgagaaagtgcgtagtgtggaggagatggagcgccctcta
gcccagactctagaggcctgggtactgcaacaggcagtgactggtctcactctgggggga
aggctggagcaggcagaagccctctgctcacaagtgctcaatgtttctccagaacaccca
gcagtgatgctgtcactgagacaggtgcagtgtcagcgcctccttgttgccaatggtggt
actgtcctcccagactctgtgctggagcaactcaacagcactgtgatggtgaaccccacc
aaccttggggcatggcactggctggctgaggtgtatcgtagccagggcctgctggtccag
gcagtcatggcttacaggcagagtctgcaggtagcctcacagctcggcctgcacagcagc
caggtagccagcctgctccgactagccctgctagccctaggaccccttatggcgggtgtc
ccaggaaacgactggactacgctgatactagaagccaccgctgaggtcttgaagctgggt
tcatcccctatggccctccttttccaggccctgctccagtatgtgaccaagatggctgct
agggaaacaaggcgtttgttggagaagctggtatacgccccctctcaagacttcccagtg
acagtggtgcaggtggccagctggtacctcctcagacacttgcatgccaaaaacgaccag
gagctaatgaatgtccttttgcaacatgccaaaatgaatggagatcaaagactgctggag
tttcattcactgcttgcctctacttcatcctga
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integrated database retrieval system
