Siniperca chuatsi (mandarin fish): 122882914
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Entry
122882914 CDS
T08948
Symbol
usp19
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 19 isoform X1
KO
K11847
ubiquitin carboxyl-terminal hydrolase 19 [EC:
3.4.19.12
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
schu01002
]
122882914 (usp19)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
schu04121
]
122882914 (usp19)
Enzymes [BR:
schu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122882914 (usp19)
Peptidases and inhibitors [BR:
schu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
122882914 (usp19)
Ubiquitin system [BR:
schu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122882914 (usp19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP19_linker
UCH_1
zf-MYND
CS
USP7_C2
MYND_ZMYND11_ZMYD8
Motif
Other DBs
NCBI-GeneID:
122882914
NCBI-ProteinID:
XP_044066778
LinkDB
All DBs
Position
LG10:3474814..3506369
Genome browser
AA seq
1571 aa
AA seq
DB search
MASSGGSGVAGSETVGRRGGAQQRGGSGRDNSSDLSSSTSKKKQKDRANQESREAKRAAA
AAVDGVIAEVKKDVFVDWKQNVNEVTVRLRCGEGVQRIEDIITTFTDTHCHVCFPDGRQW
SCQLQEEIEASCSRVQYKEKGGFLHVIMQKKIPFHIWPSLKSNKKEKEAVPTETKNDKEL
EMKPVALESSEKPKLSSLQPQLQPQPPSSPAHSESRRSGGKAERGVKRCLKNKAACEATT
DSVGVKGGAGDGSVTTSKPVKVTRGEQQPQEPSAKRTVVRLPKTTKEATSLANTDTHSVK
STVANGKAPHTHLPAGRSPQMQHKDGDNRTGRLGSGQEQKPGVAVAAASHNNKTQDAEKR
NQSSDRSGATAHGSDSQPAAPVSTTDCHKAVGLDSASPEKLGDRTDSEPEKKPVGQESEQ
DSLIRQHLGSREAGSVPAVGVAAKQGQSPYLAQRQGSCDGEEKQDQSKEEPPLEMKQQEA
PEQMVNLQFVKNDSYEKGTDLMVVNVYMKGICRDTARVIFREQDYTLIFQTSDANFLRLH
SDCGPNTVFKWQVKLRNLIQPEQCSYSFTPSRLDITLKKRHSQRWGGLEAPATQGAVGGA
KVAVPSSPTCMDKSQPGSSQHTLPAKEEPPRVGEEKPKAPKASSRVEDGGLDTVAPRTVS
EHVAITKPEPTVTTPKPTCMVQPMTHAPPASNERHEEEEEKKVCLPGFTGLVNLGNTCFM
NSVIQSLSNTRELRDYFHDRAFEAEINCNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPS
KLKAIVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTETVDSDGRLDEVVAE
EAWQRHKMRNDSFIVDLFQGQFKSKLVCPTCSKVSITFDPFLYLPVPLPQKQKVLSVYYF
SKEPHKKTIKFLVSVSKENSSTAEVLESISRSVRVKPENLRLAEVGKNRFQRMFLPSHSL
DTVSSSDMLFCFEVLSKDIAKERVVLLRVQQRLQVPNIPISKCAACLKPPVSEEDKLKRC
TRCYRVGYCNQVCQKTHWPNHKGLCRPNTENVGLPFLVSVPESRLSYSRLTQLLEGYSRF
SVNVFQPPFQSGRLSPESSQCRVDLPPMPAGSPEGLGPGDEAMGGSSTVGVGDLELESHS
LLPESQAEYAQASALHSGEPDTLSSQTSLSTTRTTDSGFSEPISSTSCCSLDPHAEKETS
CEKAVRPEAAVTGYQHPSESASGHASQFYIALLDSNNKEQRLDEKEDALTDLPEDSLLEL
VWKNNERLKEYVLVSSKELEYEEDPGSLSETARAGHFTLEQCLNLFTKPEVLAPEEAWYC
PKCQQHREASKQLLLWRLPNVLIIQLKRFSFRSFIWRDKINDMVDFPVRNLDLSKFCIGQ
KDEMQQPPIYDLYAVINHYGGMIGGHYTAYARLPSDKNSQRSDVGWRLFDDSTVTMVEES
QVVTRYAYVLFYRRRNSPVERPPRFLRPVGAESPTAAGATASQASLIWQELEEEEEGLDE
GPRGLFRSALRRGQMARNRDEEDEDRTEGSARRHRRQTMSDYPDDDCVRYFVLGTLAAVF
ALFVNLVYPLL
NT seq
4716 nt
NT seq
+upstream
nt +downstream
nt
atggccagcagcggtggtagtggtgtggctggtagcgagacagtgggccgtcgtggtggg
gctcagcagagaggaggcagcgggagagacaacagctcagacctgtcctccagtaccagt
aagaagaagcagaaggacagggccaaccaggagagcagagaggccaagagggcagccgct
gcagcagtagatggggttattgcagaggtcaagaaagatgtgtttgtggactggaagcag
aatgtcaatgaagtgactgtcagactgcgctgtggggagggggtgcagaggattgaggat
atcattacaaccttcactgatacacactgccatgtgtgcttcccagatggacggcagtgg
agctgccaattgcaggaggaaattgaggcttcgtgtagcagagtccagtacaaggaaaaa
ggaggttttctgcatgtcataatgcagaagaagattccctttcacatctggccttcgctt
aagtcaaacaagaaggagaaggaggcagtgcccacagagaccaaaaatgacaaggagctg
gagatgaaacctgttgccttggagtcatcagagaaacccaaactgtcgtccttgcagcca
caactccagccccagcctccctcctcacctgcacacagcgagtcaagacgcagcggtggc
aaagctgagcggggtgtcaagcgctgcctgaaaaacaaagcagcgtgtgaggccactacg
gactctgtaggggtgaaaggtggagcgggagatggctcagtcaccaccagcaagcctgtt
aaagtcacgagaggcgagcagcagcctcaggaacccagtgccaagcgcaccgttgtacgg
ctgcccaagaccaccaaggaggctacgtcactggccaacacggacacacactctgtcaag
tctacagtagccaatggtaaagctccacacacacacctgcccgctggtcggagcccgcag
atgcaacacaaagatggagacaacagaacggggagactaggcagtggccaggaacagaaa
ccaggagttgctgtcgctgctgccagccataacaacaaaactcaggatgcagagaagcga
aaccagtcttcagacaggtccggagcaacagcacatggcagtgatagccaaccagcagct
cccgtcagcaccactgactgccacaaagctgtcggcttggactccgcttctccagaaaag
ctgggagatagaactgactctgagccagagaaaaagcctgttgggcaggaatcagagcag
gattctctgatccgccagcatcttggatcaagagaggcaggttcagtaccagctgttggc
gtggctgccaaacaaggccagtcaccctatctagcccagaggcagggcagctgtgatgga
gaggagaagcaggatcagtcgaaggaggagcctcctcttgaaatgaagcaacaagaagcc
ccagagcagatggttaacctgcaatttgtgaagaatgattcgtacgagaagggtaccgac
ctgatggtggttaatgtttacatgaaggggatatgcagggacacggccagggtcatcttc
agggaacaggactacacgctcatcttccagacgagtgatgctaactttctgcggcttcat
tcagactgtggaccaaacacagttttcaagtggcaagtcaaactcaggaacctgatccag
cctgagcagtgcagctactcgttcaccccgtcccgactggacatcaccctgaagaagagg
cacagtcagcgctgggggggtctggaggcccctgccacacaaggtgcagtgggtggcgcc
aaggtcgctgtgccatccagcccgacctgcatggacaagagccagccaggcagcagccag
cacaccctcccagccaaggaggagcctccgagggtcggggaggagaaacccaaggcccct
aaggcctcatccagagtggaggatggcggtctggacactgtggctcctcgcactgtctct
gagcatgttgccatcaccaagccagagcccactgttaccacgcctaaacctacctgcatg
gtgcagcccatgactcatgcacctcctgccagcaatgagcgccatgaagaagaggaggag
aagaaggtgtgcctgcctggttttacaggattggtcaacctcggcaacacctgcttcatg
aacagcgtcatccaatccctgtcgaacaccagagaactcagggattacttccatgatcga
gcatttgaggcagaaatcaactgcaataacccactaggaacaggaggcaggctcgccatt
ggttttgctgtgctgctcagggccctttggaagggaacacatcatgccttccaaccctca
aaactcaaggcgattgtggccagtaaagccagtcagtttacaggttatgcccagcacgat
gcccaggagttcatggctttcttgctggacgggctccatgaggacttgaaccgcattcag
aataaaccttacacagagacggtcgactcagatggacgactggatgaggtggtggcggag
gaggcatggcagagacacaaaatgagaaacgactcctttatagtggatctcttccaaggc
cagttcaaatccaagcttgtctgccccacatgttccaaggtgtctatcaccttcgaccct
tttctctacctgcctgtgcccttgccccagaaacaaaaggtgctctcagtttactacttt
tctaaggaacctcataaaaaaaccatcaagtttttagtgagtgtgagcaaggagaactcc
agtactgctgaagtcctcgaatccatctccaggagtgtcagggtcaaaccagagaatctc
agactggcagaggtggggaagaaccgcttccagcgcatgttcctgccgtcccattccctg
gacacggtgtcctcctctgacatgttgttctgctttgaggtgctttccaaagacattgcc
aaagagagagtggtattgctcagagtgcagcagagactccaggtccctaatatccctatc
tcaaagtgtgctgcctgcctgaagcctccagtgtctgaggaagacaagctgaagcggtgc
actcgctgctatcgtgtgggctactgcaatcaagtgtgtcagaagacccactggcccaat
cacaaaggtctgtgtcgacccaacacagagaacgtgggcctgcccttcctggtcagcgtg
ccagagtctcgactctcctattcccgtctcacccaactattagagggttactccaggttt
tccgtaaacgtgttccagcctcctttccagtcaggcaggttatcccccgaatcatcccag
tgccgggttgacctccccccaatgccagcaggctctcctgagggtcttgggccaggggat
gaggccatgggtggaagcagtactgtaggagtaggtgatctggagctggagagtcactcg
ctgcttcctgaatcccaggcagagtatgctcaggcctcagccctccactctggggagcca
gataccctctcctcccagacctcactctccaccacgcggaccacggattcaggattctct
gagccaatctcttctacttcctgctgctctttggaccctcatgctgaaaaagagacgtcc
tgtgagaaggcagtacggccagaagctgcagtaacagggtatcagcatccaagtgaatca
gcatcaggtcatgccagtcagttctacatagctctgctggactctaacaacaaggaacag
aggctggatgagaaagaggatgcattgacggacctccctgaagactcgctcctggagctg
gtgtggaaaaacaatgagcgtctgaaggagtacgtcctggtgagctccaaggagctggag
tatgaggaggaccccggctctctgagtgagacagccagagcaggacacttcaccctggag
cagtgcctcaacctcttcacaaagccagaggttctggcaccagaggaggcatggtactgt
ccaaagtgccagcaacaccgagaggcctccaagcaactgctgctgtggcgtctgcccaac
gttttgatcatccagctcaaacgcttctccttcaggagcttcatctggagggataagatc
aatgatatggttgactttcccgtcaggaatctggatctgagtaagttctgtattggccag
aaagatgagatgcaacaaccccctatctacgacttgtatgcagtcatcaaccactatgga
ggaatgataggaggccactacacggcatacgctcgcctgcccagtgacaagaacagccag
cgcagtgatgttggctggcgtctgtttgatgacagtactgtgacaatggtggaggagagt
caggtggtgacgcgctatgcctacgtactgttctaccgacgacgaaactcccccgtggag
aggccgccacgctttctcaggcctgtaggagcagagtcgcccactgctgcaggagctact
gccagccaggcctctctaatatggcaggaactggaggaagaagaggaagggctcgacgaa
gggccccgcggactgttccgctctgcgctgcggaggggacaaatggcgaggaacagagat
gaggaagacgaagacagaactgaagggtctgcgcgacgacaccgcaggcagacgatgtcg
gactatcccgacgatgactgtgtgcgatactttgttctgggcaccctggcagccgtgttt
gctctgttcgtcaatttggtctaccctcttctttag
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integrated database retrieval system
