Siniperca chuatsi (mandarin fish): 122883125
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Entry
122883125 CDS
T08948
Symbol
ap5b1
Name
(RefSeq) LOW QUALITY PROTEIN: AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
schu03400
]
122883125 (ap5b1)
DNA repair and recombination proteins [BR:
schu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
122883125 (ap5b1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
AP5B1_N
TEX19
Motif
Other DBs
NCBI-GeneID:
122883125
NCBI-ProteinID:
XP_044067301
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All DBs
Position
LG2:34345746..34350251
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AA seq
955 aa
AA seq
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MAVNWAERIAAFSRSPSRFLSGTTAEALLAELLRELRDDRASYSVKVLLLSPLCEYPTLL
CPADPVGEETALELVSVFAQCPPKSVQFRCHLLLALTSVLVCTSCVSSRSRASQDFLDLL
LQIAQDTSDLHADGAVRPLRATACDCLRELEACSPGLLSQRLELLGGLWQRETSRLHQAY
AGLHTLVLRNAVYQLTQETGAGAEHLKALLGGNTSVAWEAEQDSGLLNNKDSAILSSLVL
GPMGTVPSLQTGPDCKELRSVLSSLLEESYLLTPLCQAALLHRLTEVVAMVPGVPPAVFR
AQLLRLLGTSEVCLLHATLLMKCAFTDSLFSAEDEAFILKRLVVLSQHPLLSTPEKLFYM
ACILHFPENRPISCGDGDETLPVLLTPRLASALVPTVFNDSTTMLARLNLLSLVYLEEGE
EGEGEGQGLAYLYEHLTSLLHIVENGGSREIVVTCFRSAFLFLFYFCHVERYSDSLMEKL
CKLYLRHTHLAPHLINLADQTQDKLAESSWAVGLLKALQGVITEAPLAQLTLQDLRWHLK
MLARVAEEGEIAQHSSLSFLSSVITPSSSSLCLSGDWRLGNGLLGVCRRFLVHPSLDSLL
IPLADVLQHLTCRYGDTDIQDHARLYYTLLTTLSREKLAGVLAQGSTEGGRQVKKRSLSC
IVAESEGLTSMLTIHQTDKAIFRLTEAHSEPREETQTDKDSDLNQNETETCPGEAKAALK
AYRAQFDDTSFASEITLNYQLTHIEAEDSRFHQLFSIHLHFSLTDDHYEELSDISVPCLF
RERPSAKVRLRLKPRRPYPTTLRASAVFTTQDGLSWLTVLPDIHVAFQQAFMPPPAPPAW
GRGGRLSLFEGLWDEISSESREKDQATSLFCCQLKEAALIALVEKHFLPYLISDLSDKEE
FKVLFFLPPRLHMLLKIRSEEDTVHFNIATDSWLLLPHISSYLLTITSSQKDTHN
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgaactgggccgagaggatcgctgctttctcccgcagtccgagtcgcttcctc
tccgggaccacggccgaggctctcctggcagagctgctccgtgagctccgagatgacaga
gccagttacagtgtcaaggtcctcctgttgtctccgctatgtgagtacccgactctgctg
tgtcccgcagacccggtgggtgaggagacagccctggagctcgtgtcagtgttcgcccag
tgtcctcccaagtctgtccagtttcgttgtcacctcctcctggccctcacctccgtgcta
gtctgcacctcctgcgtgagcagccgttcccgtgcatctcaagacttcctggacctgctc
ctccagatagcccaggacaccagtgacctacacgctgacggcgccgttcgtcctttacgg
gccacggcttgcgactgcctgcgggagctggaggcctgctctccaggccttctctcccag
cgcctggagctcttaggtgggctctggcagcgagaaacctcccggctccaccaggcctat
gcaggactccatactctggtgttaagaaacgccgtgtatcagctcacccaggaaacagga
gctggtgctgagcatcttaaggctctcctgggaggaaatacatcagttgcatgggaagca
gagcaggactcaggcctgctgaataacaaagactcagccatactgtcttctcttgtcctg
ggacctatgggtacagtgccgagcctccagaccgggcctgattgtaaggagttgcgctca
gtcctgtcctccctcctggaggagtcctaccttctcacacctctgtgtcaggctgcactg
ctacacagactgacggaggtggttgccatggtgcctggtgtccctccagccgtattcaga
gctcagctgctgcgactgctgggcacgagcgaggtttgcctccttcacgccactctgctg
atgaagtgtgcgttcacagacagcctgttcagcgcggaagacgaagctttcatcctcaag
cggctggtcgtgctctcccagcacccactgctgagtacacccgagaagcttttctacatg
gcctgtatcctgcactttcccgagaaccggccaatcagctgcggcgatggtgacgagacc
ctccctgtgctgctgactccacggctagcctcggctttggtgcccactgtgttcaacgac
agcaccaccatgctggcccgcctcaacctgctgtctctggtctacctggaggagggggag
gagggggagggggaggggcaggggctggcctacctctatgaacacctcacctcgctgcta
cacattgtggaaaacggaggcagccgagagattgttgttacatgcttcagatccgccttc
ctcttccttttctatttctgccacgtggagcgctactctgacagcctgatggagaagctg
tgtaagctctacctccgccacacccacctggctccacacctcatcaacctggccgaccag
acccaggacaagctcgctgagtccagctgggctgtagggctcctgaaggccctccaggga
gtcatcaccgaggccccactcgcccagctcaccttacaagacctccgctggcacctcaag
atgctggctcgagtggcggaggaaggagaaatcgcccagcacagcagcctcagcttcctg
tccagcgtcatcactccgtcttcctcctctctgtgcttgagtggcgactggcgtctgggg
aacggcctgctgggggtttgccgccgcttcctcgtccaccccagcctggactcgctgctc
atccctctggctgacgtgctgcagcatctcacctgccgctacggagacacagacatccag
gaccacgcccgcctctactacaccctcctgaccacgctgtcccgagagaagctggccggt
gtgttggcgcagggttcaaccgagggagggcggcaggtcaagaagcggtcgctgtcctgc
atcgtggctgagagcgaggggctgacgagcatgctaaccattcaccagacggacaaagcg
atattcaggctgactgaggcccactctgagccacgagaagaaacacaaactgataaagac
agtgacctaaaccagaatgagacggagacctgcccaggagaggcgaaagcagccctgaaa
gcctaccgagctcagtttgacgacactagctttgcctcagaaatcaccttaaactaccag
ctgactcatattgaagctgaggactcccgctttcatcagctcttcagcatccacctccac
ttcagcctcacagacgaccactatgaagaactgagtgacatcagtgtcccgtgtctgttc
agagagaggccgtcggccaaggtgaggctgagactgaagcccaggcggccctaccccacc
accctccgtgccagcgccgtcttcaccacccaggacggactctcctggctcaccgtcctc
ccagacatccacgtggctttccagcaggccttcatgcctccgcctgctcccccggcctgg
ggacgaggtggcagactgagcttgttcgagggtttatgggatgaaatcagctctgagagc
agagagaaggaccaggccaccagcctgttctgctgccagctgaaggaagcagctctgatt
gccttggtggagaaacacttcctcccctaccttatatcagatctgtctgataaagaagag
ttcaaagtgcttttcttcctcccaccacggcttcacatgctgctgaagatcaggtcggag
gaagacaccgtgcacttcaacatcgccacggattcctggctgcttctgcctcacataagt
tcttatctactgacaatcacgtcctcacagaaagacactcacaactga
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