KEGG   Siniperca chuatsi (mandarin fish): 122887398
Entry
122887398         CDS       T08948                                 
Symbol
exosc4
Name
(RefSeq) exosome complex component RRP41
  KO
K11600  exosome complex component RRP41
Organism
schu  Siniperca chuatsi (mandarin fish)
Pathway
schu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:schu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    122887398 (exosc4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:schu03019]
    122887398 (exosc4)
Messenger RNA biogenesis [BR:schu03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     122887398 (exosc4)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     122887398 (exosc4)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 122887398
NCBI-ProteinID: XP_044076518
LinkDB
Position
LG13:13122594..13124733
AA seq 245 aa
MAGLELLSDQGYRLDGRKATELRKVQGRMGVFAQADGSAYIEQGNTKALAVVYGPHEMRG
SRSRTRHDRAVINCQYSMATFSTAERKRRPHGDRKSTEMSLHLKQTFEAAVMTQLYPRSQ
IDIYVKILQSDGGNYSVCVNAATLAVIDAGIPMRDYVCACTVGFVDETPLADLCYAEESG
GVSSLALALLPRGGQIALLQMDARLHQDHLEALIEAAMTACKGVSKVLDEVVRQHLQEVS
VLSGE
NT seq 738 nt   +upstreamnt  +downstreamnt
atggcgggcctggagctgctgtctgaccagggataccgtttagatggaagaaaagccacc
gagctgcggaaagttcagggccgtatgggtgtgttcgctcaggctgacggctccgcgtat
atagagcagggaaacacgaaagctctggctgtggtatacggtccacatgaaatgcgaggt
tcacgcagccggactcgtcacgatcgagctgttatcaactgtcagtacagcatggccaca
ttcagcacagcagagaggaagaggagacctcatggggaccgcaagtctactgagatgagc
ctccacctgaagcagacatttgaagctgctgtgatgacccagctctacccacgttctcaa
atagacatctatgtcaagattctgcagtcagatggagggaactacagcgtgtgtgtgaat
gcagccactctggcggtgatcgacgccggcatccccatgcgggactacgtttgtgcctgc
acggttgggtttgtggatgagacacccctcgctgacctttgctatgcagaggaaagtgga
ggtgtgagctctctggccttagcgctgctgccccggggcggacagattgctctgctgcag
atggatgccagactacatcaggatcatttagaggctctgatcgaagctgccatgacggct
tgtaaaggtgtgagcaaggtgctggatgaggtggtgcgacaacatctccaagaagtatct
gtgctctctggagagtga

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