Siniperca chuatsi (mandarin fish): 122887398
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Entry
122887398 CDS
T08948
Symbol
exosc4
Name
(RefSeq) exosome complex component RRP41
KO
K11600
exosome complex component RRP41
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122887398 (exosc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schu03019
]
122887398 (exosc4)
Messenger RNA biogenesis [BR:
schu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
122887398 (exosc4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
122887398 (exosc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
122887398
NCBI-ProteinID:
XP_044076518
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Position
LG13:13122594..13124733
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AA seq
245 aa
AA seq
DB search
MAGLELLSDQGYRLDGRKATELRKVQGRMGVFAQADGSAYIEQGNTKALAVVYGPHEMRG
SRSRTRHDRAVINCQYSMATFSTAERKRRPHGDRKSTEMSLHLKQTFEAAVMTQLYPRSQ
IDIYVKILQSDGGNYSVCVNAATLAVIDAGIPMRDYVCACTVGFVDETPLADLCYAEESG
GVSSLALALLPRGGQIALLQMDARLHQDHLEALIEAAMTACKGVSKVLDEVVRQHLQEVS
VLSGE
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcctggagctgctgtctgaccagggataccgtttagatggaagaaaagccacc
gagctgcggaaagttcagggccgtatgggtgtgttcgctcaggctgacggctccgcgtat
atagagcagggaaacacgaaagctctggctgtggtatacggtccacatgaaatgcgaggt
tcacgcagccggactcgtcacgatcgagctgttatcaactgtcagtacagcatggccaca
ttcagcacagcagagaggaagaggagacctcatggggaccgcaagtctactgagatgagc
ctccacctgaagcagacatttgaagctgctgtgatgacccagctctacccacgttctcaa
atagacatctatgtcaagattctgcagtcagatggagggaactacagcgtgtgtgtgaat
gcagccactctggcggtgatcgacgccggcatccccatgcgggactacgtttgtgcctgc
acggttgggtttgtggatgagacacccctcgctgacctttgctatgcagaggaaagtgga
ggtgtgagctctctggccttagcgctgctgccccggggcggacagattgctctgctgcag
atggatgccagactacatcaggatcatttagaggctctgatcgaagctgccatgacggct
tgtaaaggtgtgagcaaggtgctggatgaggtggtgcgacaacatctccaagaagtatct
gtgctctctggagagtga
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