Siniperca chuatsi (mandarin fish): 122888202
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Entry
122888202 CDS
T08948
Symbol
brwd3
Name
(RefSeq) LOW QUALITY PROTEIN: bromodomain and WD repeat-containing protein 3
KO
K11798
bromodomain and WD repeat domain containing protein 1/3
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
schu04121
]
122888202 (brwd3)
Ubiquitin system [BR:
schu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
122888202 (brwd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_RIG_2nd
ANAPC4_WD40
NBCH_WD40
Beta-prop_HPS5
Beta-prop_DCAF12
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_Nup120_160
WDR54
Auxin_resp
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
122888202
NCBI-ProteinID:
XP_044078227
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Position
LG14:9931885..9952333
Genome browser
AA seq
1782 aa
AA seq
DB search
MAREQCSQTEAELYYLIARFLQSGPCKKSAQILVEELEEYELVPERWSWDGKKYKRTFQD
WVILNQHIPADYLLRVCQRIGPLIEKXIPPSVPGVQTLLGLGRQSLLRTTKSCSHKVCSG
SAVAALHRGRPPEPPVSSGDPPNVVSIMGARQATGTARFSQALPSSSYQHMKIHKRILGH
LSSVYCVAFDRTGRRIFTGSDDCLVKIWATDDGRLLSTLRGHSAEICDMAVNHENTLIAS
ASCDKTIRVWCLRTCAPITVLQAHGASITSIQFCPAVKGTTRYLASTGADGMVCFWKWHS
ISMKFNDQPVKFVERSRPGVQVSTSSFSSGGMFMATGGTDHLIRVYYLGAETPMKVSEMD
AHTDKVVVVQFSNNSDSLRFVSGSRDGTARIWHYQQQEWKSVTLDMAARLPGSTVANGDD
KTKLVVTMVAWDRADSTIITAVSNYLLKVWSTTTGQLLHVLSGHDDEVFVMEAHPFDSRI
MLSAGHDGNIYIWDLTKGAKIRNFFNMIEGQGHGAIFDCKFSADGQHFACTDSHGHLLIF
GFGCSRPYEKIPDQMFFHTDYRPLIRDSNNYVLDEQTQQAPHLMPPPFLVDVDGNPHPPQ
YQRLVPGRESCKEEQLVPQLGYMANSDGELVEQVLGQQTAENRESLLDNLIRQLQNEQDE
RQNAEEQAEEVEADNVAEMVASSPAVGPRRSRQVDGVWQMQHNALRSQVATERDLLAWSR
RVMVNEVPHGTFRVLEECRQAKGDMECSLYNAERRKKPVTCAPKSDPMTSRLRSLRPTKK
KQQHHAYQTRSAQVRRPGTRSRNPSNRRNSDSQIESDSDGDAAEQVEQSDASSDGEAQWQ
SESSSSNSSSDYSDWTADAGINLQPPKRPIRRPVQPQGYSSSEEEEGNDQAKEAKKRDNE
KRKKPKETKQKPTSSLAGLDAEEWLPPSWIMETIPRRSPFVPQMGDELIYFKQGHQAYVR
AVRRAKAYSINPQKQPWNKLDLRDQESVKVVGIKYEVGPPTLCCLKLAFLDPVSGKMTND
SFSLKYHDMPDVIDFLVLQQFYNEAKEHNWQPGMRFRSIIDDAWWFGSVEDQEPLQQEYP
DSLFQCYAVKWDNGEREKMSPWDMEPIPEEAALPEHVGDGVEVAEEEIKALLYRPQEGEW
GAHTRDEDCERVIHGIDQLLTLEVAKAFTSPVNLRDYPLYCTVVAYPTDLSTIRKRLENR
FYRRISALMWEVRYIEHNARTFNEPQSPIVASAKVVTDVLLHYIGDQSCTDILDLYHKLK
SEVSSGGEAEAELDVDSDTPGTSTGHRGANLNSKKRGVALDVKAWRGQCRELLRRMIASP
DSEPFRRPVDLFEYPDYRDIIDTPMDLGTVSETLVEGNYENPMEFAKDVRLIFSNSKAYT
PNKKSQIYTMTLSLSAFFEKHIISIISDHKSAIQNERRSRQRLSYRDRLHNGGSSPPISP
SPSPKGKHKSGKVSKPKKSQTSTKNRSQRPHQAQQSSSVAEEEDIQPSSPSSGTSSGSRD
EGPHRVTRSQATPEKKSGHQRNLHLSNGSRQRHRREALQSDDDEEASGSNSSSSESSSTS
SSSSSSSSSDSENSSDSEMEKYVEGGDHDYSKAPCLSVRLLAKGKVAVSGKRKHKGGEDV
AQRHKRARVQLPVEQGEDEEDEDEEEEEEDEEQQQQQVIVRQEEEEEEGEEEDEEEEEEP
EEEEEPEEEDPEEEEEEDEDNSDEVQRGAAAAVASSPRGSQCKTRRVNTRNQGRRTVLYR
DDSEDDGHGSKEDPLNLGMSRSGRVRRMTEKARVSHLMGWGH
NT seq
5349 nt
NT seq
+upstream
nt +downstream
nt
atggcaagagaacagtgttcacaaaccgaagctgaactgtattacctcattgccagattt
ctgcagtctggaccttgtaaaaaatcagcacagattctggtcgaggagctggaggagtat
gagttggtccctgaacgatggagttgggacgggaagaaatacaaacggaccttccaagac
tgggtgattttgaaccagcacattcctgcagactatctgctccgtgtttgccagcggata
ggcccgcttatagagaagnagatcccacccagtgttcccggagtccaaacacttctgggg
ctgggaagacagtccttgcttcgtaccaccaaaagttgtagccacaaagtatgcagtggc
tcagctgtcgctgcactccaccgaggccgtccaccagaacctccagtcagcagtggagat
cctcccaatgttgtgtccatcatgggtgctcgccaggccacaggcacagctcgtttcagc
caggccctgccatcttcctcctaccaacacatgaagatacacaaacgtatccttggccac
ctctcttcagtctactgtgtggcctttgaccgcaccggtcgtcggatatttacgggttct
gatgactgcctggtgaaaatctgggccacagatgacggccggctcctgtcgacactccgc
ggccactcagcagagatctgtgacatggccgtcaaccacgagaatactctcattgcctca
gcaagctgtgacaaaaccatcagagtgtggtgcctacgtacatgtgcacccatcactgtt
ctgcaggcccacggtgcctccatcacatccatacagttttgtcctgctgtcaaagggaca
acgcggtacctggcctccaccggtgcagacggcatggtgtgtttctggaagtggcactcg
atcagcatgaaattcaatgatcaaccagtcaagtttgttgagcggtcacgtccaggagta
caggtctcaacttcctcctttagtagtggtggtatgttcatggctaccggtggcactgat
catttgatcagggtctactaccttggtgctgaaactcctatgaaggtctctgagatggat
gctcacacggataaagttgtagttgtccagtttagcaataacagtgacagcctaaggttt
gtgagtggcagtcgcgacggcacagccaggatttggcattaccagcaacaagagtggaag
agcgtcactttagacatggctgccaggctgcctgggagtactgttgccaatggggatgat
aaaaccaagctggtggtgaccatggtggcctgggaccgtgcagatagcaccatcatcaca
gcagtgtcaaactacctgctcaaagtgtggagcacaacaactggacagctgctgcatgtt
ttatctggtcacgatgatgaggtgtttgtgatggaggctcacccatttgactcccgcatc
atgctgtctgctggccatgatggcaacatttacatctgggacctgaccaaaggagccaag
atccgcaacttcttcaacatgattgaagggcaaggccacggtgctatttttgactgcaag
ttctcagctgatgggcagcattttgcctgcactgactcacacggccatttgctgatcttt
ggcttcggctgcagcagaccatatgagaagattcctgaccagatgttcttccacacggac
taccgacctcttattcgtgactctaataactacgtgctggacgaacagacgcaacaagcc
ccacacctcatgcctccacccttcctggtggatgtcgatgggaatcctcaccctcctcag
taccagcgcctggtgccaggaagagagagctgcaaggaggagcagctagtaccccagcta
ggatacatggctaacagcgatggagagttggttgagcaggtacttggccagcaaacggca
gaaaacagagaaagcctattggacaatctcatcagacagctgcagaatgagcaggacgag
cgtcagaatgcagaagagcaggctgaagaggttgaggctgataatgtagcagagatggtg
gcctcctctccagctgttggaccacgcagaagtaggcaggtggatggcgtgtggcagatg
cagcataatgccctgcgtagtcaagtggccaccgagagggacctgctggcctggagtcga
agagtgatggtcaatgaagtgccgcatgggacattcagagttttggaggagtgcagacaa
gccaaaggcgacatggagtgttctctatacaatgccgagagaaggaagaaaccagtaact
tgtgcacccaagagtgatccaatgacttcacgcctgcgctccctgcgaccaaccaagaaa
aaacagcaacaccatgcctatcagacccgctcagctcaggtccgacgtcctgggaccagg
agtcgaaatcccagcaaccgccgtaactctgacagccagatagagtctgacagtgatgga
gatgcagcagaacaggtggagcaaagtgatgcctcctctgatggtgaagctcagtggcag
agtgaaagcagctccagtaactcctccagtgactattctgattggacagccgatgctggg
atcaacctccagccgccgaagcgaccaatcaggaggcccgtacagccccaaggttacagc
agctctgaggaggaagaaggcaatgaccaggcaaaggaggccaagaagagggacaatgag
aagaggaagaagcccaaggagaccaaacagaaacccacgtcctctctggctggactcgat
gcagaggagtggctgccaccatcatggataatggagaccatcccacgccgctctcctttt
gttccacagatgggagatgagctcatctacttcaaacagggccatcaggcctacgtccgg
gctgtccgcagggccaaggcctacagcatcaaccctcagaaacagccgtggaacaaactc
gacctcagggaccaggaatctgtgaaggtggttggaattaaatatgaagtgggacctccc
accctttgctgcctaaaactggctttcttggacccagtctcagggaagatgaccaatgac
tctttctccttaaagtaccatgacatgcctgatgtcatagattttctggtactgcagcag
ttttacaacgaggctaaagagcacaactggcagccaggtatgaggttccgcagcatcatt
gatgatgcctggtggttcggctctgtggaggaccaggagcctctgcagcaagagtatcca
gatagcctgtttcagtgctatgcagtaaagtgggataatggtgagcgtgagaaaatgagt
ccctgggacatggagcctattcctgaggaagctgcattgccagaacacgttggtgatggc
gtggaggtagcagaggaggagataaaggctctactttacaggcctcaggaaggagaatgg
ggggctcacacacgagatgaagactgcgagagagtcatccatggcattgatcagcttctt
acactggaggtagcaaaagcattcacgtcaccagtaaatctgcgggactaccctctgtac
tgcactgtggtggcttaccccactgacctcagcactatccgcaaacgactggagaaccgc
ttctacaggcggatctctgcattaatgtgggaggtgcgctacattgaacacaatgcccgc
actttcaacgaaccccagagccctattgtagcatctgccaaggtggtgactgacgttctc
ctgcattacatcggggaccagagctgcacagacatcttggatctgtatcacaaactgaag
tctgaggtcagcagtggaggagaagctgaggctgagttggatgtggactctgacactcca
ggaacatctacaggacatcggggagccaacctgaattctaagaagcgtggtgtggctctg
gatgtgaaagcatggcgaggtcaatgccgagagctgctgcgtcgaatgatagcctcgccg
gattcagaaccgttcagacggcctgtggatctctttgagtatccggactatcgagatatc
attgacactcccatggatctgggtacagtgtcagagacgctggttgaagggaattatgaa
aacccgatggagtttgccaaagacgtgcgcctcattttcagcaactccaaagcatacaca
cctaacaagaaatcacagatctacaccatgaccctcagcttgtcggccttctttgaaaaa
cacatcatttccatcatctctgaccacaagtctgccattcagaacgaacggcggtctcgt
cagagactcagttacagggacagattgcacaacggaggcagctcaccgccgattagtcca
tcccccagtcctaaagggaagcacaagtcagggaaggtgtcaaagccaaaaaaatcccag
acctcaaccaagaatcgttctcagagaccacatcaggctcagcaaagcagcagtgtagca
gaggaagaggacatccagccttcttccccaagttcagggacaagcagcgggagcagagac
gaggggccacatcgggtgacccgcagccaagcaactccagagaagaagtcagggcaccag
cgtaacttgcatctaagtaacggctctagacagcgccacaggcgagaagcgctgcagtct
gacgacgatgaggaggcttccggatccaacagctcctcgtcagagtcatcctccacctca
tcgtcctcgtcttcctcgtcatcgtcggacagtgagaacagctctgattctgagatggag
aagtacgtggaagggggagatcacgactacagcaaagccccctgcctgtcggtacgcctc
ttagctaagggcaaggtggcagtctcagggaaaaggaaacacaagggaggagaggacgtg
gcacagagacataaaagagcacgagtgcagctgccagtagagcagggggaagatgaggag
gatgaggatgaagaagaagaggaggaggatgaagaacagcagcagcagcaggtgattgta
agacaagaagaagaagaggaggaaggagaggaggaggatgaagaggaagaggaggagccc
gaggaggaggaggaacctgaggaggaggatcctgaggaggaggaggaggaggatgaggac
aactctgatgaggtgcagagaggggctgcagcggcagtagcaagcagtccaagaggcagc
cagtgcaagactcggcgggtcaacacacgcaaccagggccgcaggacagttctgtacagg
gacgactcagaggatgatggccatgggtcgaaggaagaccccctcaacctgggtatgtcc
cgctcaggacgggtacgccgtatgactgagaaagcccgtgtcagccacctcatgggctgg
gggcactga
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