Salicibibacter cibi: HUG20_14985
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Entry
HUG20_14985 CDS
T07369
Symbol
mutM
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
scib
Salicibibacter cibi
Pathway
scib03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
scib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HUG20_14985 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scib03400
]
HUG20_14985 (mutM)
Enzymes [BR:
scib01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
HUG20_14985 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HUG20_14985 (mutM)
DNA repair and recombination proteins [BR:
scib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HUG20_14985 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
RNHCP
Motif
Other DBs
NCBI-ProteinID:
QQK81073
UniProt:
A0A7T6ZCQ0
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All DBs
Position
complement(3021469..3022293)
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AA seq
274 aa
AA seq
DB search
MPELPEVEIVRRTLTKLVQKKQIMDVEVGWPKMIKEPDDVEAFRFFLAGQTIQQIDRKGK
FLIFGLDDYALVSHLRMEGKYSLSEEAPTKHTHVRFFLHDNSELHYNDVRKFGTMHLFPK
GTELGVAPLSKLGPEPMDPSFKLSYLRGKFAKTTRNVKAVLLDQSVVAGLGNIYVDEALF
RAGIFPGRPAASLDDDTILRVHRETISTLEAAIESGGSSIRSYLNGNGEMGYFQQQLYVY
GRKGQPCKKCAGKIERTVVAGRGTHHCPNCQPSE
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgccagagttgccggaagtggaaatcgtaaggagaacgttaacgaaactcgtgcaaaag
aagcaaatcatggatgtggaagtcggatggccgaaaatgataaaggagccggatgacgtg
gaggcgtttcgtttttttctcgcgggacaaacgattcaacagattgatcgaaaaggaaag
tttctgatctttggtttggatgattatgcgctcgtctcccatttacgcatggaagggaaa
tacagcctaagtgaggaagcgccaacgaaacacacgcatgtacgcttttttcttcacgac
aacagtgaacttcattacaacgatgtgcgtaaatttgggacgatgcatttgtttccaaaa
ggcacagaacttggtgttgcaccgctttcaaagctaggtccggaaccgatggatccttcc
ttcaagctttcttacctacgggggaaatttgcgaaaacgacccgcaatgtaaaagctgtg
ttgcttgatcagtccgttgttgccgggcttggaaacatttatgtagatgaggcgttgttt
cgcgccgggatttttcccgggcgcccggctgcttcgcttgatgatgacacgatattacgc
gtacatcgagaaacgatttcaaccttggaagcggccatcgaatccggaggttcatccatt
cgttcgtatttgaacgggaatggggaaatggggtattttcagcaacaattgtatgtgtat
ggccgtaaagggcaaccatgcaaaaaatgtgcagggaaaatcgaacgaacagtcgttgcc
ggacgcggaacgcaccattgcccaaattgccagccctcggaatga
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