Streptomyces cinnabarinus: STRCI_006589
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Entry
STRCI_006589 CDS
T08957
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
scir
Streptomyces cinnabarinus
Pathway
scir03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
scir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
STRCI_006589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scir03000
]
STRCI_006589
03400 DNA repair and recombination proteins [BR:
scir03400
]
STRCI_006589
Enzymes [BR:
scir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
STRCI_006589
Transcription factors [BR:
scir03000
]
Prokaryotic type
Helix-turn-helix
AraC family
STRCI_006589
DNA repair and recombination proteins [BR:
scir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
STRCI_006589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
DUF6233
Motif
Other DBs
NCBI-ProteinID:
WAZ27256
UniProt:
A0ABY7KRP1
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All DBs
Position
7281905..7283368
Genome browser
AA seq
487 aa
AA seq
DB search
MHTETEACVRAVQAKDARFDGWFYTAVLTTGIYCRPSCPVVAPKPQNMVFHPSAAACQQA
GFRACKRCRPDASPGSPEWNQRADLVARAMRLIADGVVDREGVPGLAARLGYSTRQIERQ
LLAELGAGPLALARAQRAQTARLLIETTPLPMAEIAFAAGFSSIRTFNDTVREVFALAPS
ELRARAPRPGQTPGALALRLPFRAPLNPDNLFGHLAATAVPGVEEWRDGAYRRTLRLPYG
HGIVSLTPKPDHIACRLTLSDLRDLTVAISRCRRMLDLDADPVAVDEQLSTDPLLAPLVA
KAPGRRVPRTVDEAEFAVRAVLGQQVSTAAARTHAARLVTAHGEPVDDPEGGLTHLFPAP
EALAALDPESLAMPRTRRTTFTTLVGQLADGSLHLGVESDWAQARARLLALPGFGPWTVD
VIAMRALGDPDAFLPTDLGIRRAAGELGLPSTPAALTARAAAWRPWRAYAVQYLWATDSH
PINFLPV
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgcacaccgagaccgaagcctgtgtacgggccgtccaggcgaaggacgcgcgcttcgac
ggctggttctacacggccgtcctgaccaccgggatctactgccggcccagctgcccggtg
gtagcgcccaagccgcagaacatggtgttccacccgagcgccgccgcctgccagcaggcc
gggttccgggcctgcaagcggtgccgtccggacgccagccccggctccccggagtggaac
cagcgcgccgacctcgtcgcccgcgcgatgcggctgatcgccgatggggtcgtggaccgc
gagggcgtgcccggcctcgcggcccggctcggctacagcacccggcagatcgagcgccag
ctcctcgccgagctgggcgcgggcccgctcgccctggcccgcgcccaacgcgcccagacc
gcccgcctgttgatcgagaccaccccactgccgatggcggagatcgccttcgccgccggg
ttctcctccatccgcaccttcaacgacaccgtgcgcgaggtgttcgccctcgccccgagc
gagctgcgggctcgcgcgccccgcccgggacagacgcccggggcgctcgccctgcgcctg
ccgttccgcgccccgctcaaccccgacaacctcttcggccacctggccgcgaccgccgtc
cccggcgtcgaggagtggcgggacggcgcctaccgccgcaccctgcgcctgccctacggc
cacggcatcgtgtccctgacccccaagcccgaccacatcgcctgccgcctcaccctcagc
gacctgcgcgatctcaccgtggcgatcagccgctgccgccgcatgctcgacctggacgcc
gacccggtcgccgtcgacgagcagctcagcacggacccactcctcgcacccctggtcgcc
aaggcccccggcaggcgggtcccgcgcacggtcgacgaggcggagttcgccgtacgggcc
gtgctcggccagcaggtctccaccgccgccgcgcgcacccacgcggcccgtctggtcacc
gcccacggcgaaccggtcgacgaccccgagggcggcctcacccacctcttcccggcaccc
gaggcactcgcggcgctcgacccggagtcgctggcgatgccgcgcacccgccgcacgacg
ttcaccacgctggtcggccaactcgccgacggaagcctgcatctgggcgtggagagcgac
tgggctcaggcccgcgcccggctcctcgcgctgcccggcttcggcccgtggacggtcgac
gtcatcgcgatgcgcgcgctcggcgaccccgacgccttcctccccacggacctcggaatc
cgccgcgcggcaggggagttgggcctgccctccacccccgccgccctcaccgcccgcgcc
gcggcctggcggccctggcgggcgtacgccgtccagtacctgtgggcgaccgacagccac
ccgatcaacttccttccggtataa
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