Sorangium cellulosum So ce56: sce1644
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Entry
sce1644 CDS
T00634
Name
(GenBank) RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
scl
Sorangium cellulosum So ce56
Pathway
scl02020
Two-component system
scl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
scl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
sce1644
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
sce1644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scl03021
]
sce1644
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
scl02035
]
sce1644
Transcription machinery [BR:
scl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
sce1644
Bacterial motility proteins [BR:
scl02035
]
Flagellar system
Flagellar assembly proteins
Stator
sce1644
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r4_2
Sigma70_r2
HTH_23
Motif
Other DBs
NCBI-ProteinID:
CAN91802
UniProt:
A9FDW9
LinkDB
All DBs
Position
2256279..2256947
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AA seq
222 aa
AA seq
DB search
MRTPEDRLLAEGLDLLQLVAKRIARRLGRRIPVEDLVALGHPALLEIVRTHDPSRSTFEA
YAKRKLRWAIFDGVRRETRWRSAAARASALAASARFAEGRGADDDADAPATQEAYAARLG
DLLAGHAAAMALGLLSSHGDVAAVPDAADDPEERASRAELAQAVRHAVRELPERERTLVE
RHYFEDERFDQIAQDLGISKSWASRLHSQAIERLCELLRTAR
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcactccggaagaccggctcctcgccgaggggctcgacctgcttcagctggtcgcg
aagcgcatcgcgcgccgcctgggccgccgcatcccggtggaggacctcgtcgcgctgggg
cacccggcgctgctcgagatcgtgcggacgcacgatccgagccgatccaccttcgaggcc
tacgccaagcggaagctccggtgggccatcttcgacggcgtccggagggagacgcgctgg
cgttccgcggccgcgcgggccagcgcgctcgctgcgtcggcgcgcttcgcggagggacgc
ggggcggacgacgacgccgacgcgcctgccacgcaggaggcctacgccgcgcggctcggc
gatctgctcgccgggcacgcggccgcgatggcgctcggcctgctctcgagtcacggggac
gtcgccgccgtccccgacgccgcggacgacccggaggagcgcgcctctcgcgccgagctc
gcgcaggccgtgcgccacgccgtgcgcgagctcccggagcgcgagcgcaccctcgtggag
cgccactacttcgaggacgagcgcttcgatcagatcgcgcaggatctcgggatcagcaag
agctgggcgagccggctgcacagccaggcgatcgagcggctgtgcgagctgctccgcaca
gcgcgctga
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