Sorangium cellulosum So ce56: sce6839
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Entry
sce6839 CDS
T00634
Symbol
pelA
Name
(GenBank) High confidence in function and specificity
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
scl
Sorangium cellulosum So ce56
Pathway
scl00040
Pentose and glucuronate interconversions
scl01100
Metabolic pathways
scl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
scl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
sce6839 (pelA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
sce6839 (pelA)
Enzymes [BR:
scl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
sce6839 (pelA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
CAN97008
UniProt:
A9GTX6
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All DBs
Position
complement(9543624..9544874)
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AA seq
416 aa
AA seq
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MTHAYRLASFSILGLLIACSSTDPDTTPGAGAGSGGTSGAGQTTGGGGVTTTGGASTTTG
GTGGAGATTGATGGVAAGAAGSGGAGAGGGDTDGAGAGGGGTGGSTPVGDLHITDPVPGF
ASVAGGTTGGGTDLSSAITVDSMSALQDAAKGSTPAIILVKPGNYSGTLAPGANKTIIGI
GPGVTITGNIRMSGAGVNNIIIRNLAVRGARCASYDECKAGADAVYTGNGAHHVWLDHLD
ISDGQDGNCDITQGADYVTVSWSRFYYTYDKEHRFSNLIAGSDDEPASQGKLHITYMNSH
WGERVDSRQPRGRYGNVHMLNNYHKTGGGQIHGVGKDMALIAENCVYDENRSIWTDMGSP
RGWKGIGNQGTGDDLNDSRGTVFEIPYRYTPMPASQVVAAVTSKECGAGNTCTLAY
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgacccacgcgtatcgactcgcctccttctcgatcctcggcttgctgatcgcttgcagc
tcgacggatcccgacaccacgcccggcgccggcgcgggctctggaggaacctcgggcgcg
gggcagacgaccggcggaggtggcgtgacgaccacgggcggtgccagtaccaccacgggc
ggaacaggcggggccggagccaccaccggcgcaacgggcggcgtcgccgcgggcgcggcc
ggctcgggtggagcgggcgctggtggcggggacacggatggagcgggcgctggtggcggc
ggtaccggcgggtcgacgccggttggggacctccacatcacggatcccgttccaggcttc
gcgagcgtcgctggcggcacgaccggcggcggcacggatctgagctcggccatcacggtg
gactcgatgagcgcgctccaggacgcggcgaagggctcgaccccggcgatcatcctcgtg
aagcccgggaactacagcgggacgctcgcgccaggcgccaacaagacgatcatcggcatc
ggccccggcgtgaccatcacaggcaacatccggatgagcggcgccggcgtgaacaacatc
attatccgcaacctcgccgtgcggggcgcgcgttgcgccagctacgacgagtgcaaggcc
ggcgcagacgccgtgtacaccgggaacggcgcccatcacgtctggctggaccatctggac
atctccgacggtcaggacggcaactgcgacatcacccagggagccgactacgtcaccgtt
tcctggtcgcgcttctactatacatacgacaaggagcaccggttctcgaacctgatcgcc
ggcagcgacgacgagccggcgagccagggcaagctgcacatcacgtacatgaacagccac
tggggcgagcgcgtcgattcacgccagcctcgcgggcggtacggcaacgtccacatgctc
aacaactaccacaagaccggcggcgggcagatccacggcgtgggcaaggacatggcgctc
atcgccgagaactgcgtctatgatgagaacaggtcgatctggacggacatgggcagtcca
agaggctggaaggggatcggcaaccaggggactggcgacgacttgaacgactcgaggggc
accgtcttcgagatcccgtaccgctacacgccgatgccggcgtcccaggtcgtcgcggcg
gtcacctccaaggagtgcggagccggcaacacctgcacgctcgcttactga
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