Sorangium cellulosum So ce56: sce8116
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Entry
sce8116 CDS
T00634
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
scl
Sorangium cellulosum So ce56
Pathway
scl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
scl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
sce8116 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scl03400
]
sce8116 (xthA)
Enzymes [BR:
scl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
sce8116 (xthA)
DNA repair and recombination proteins [BR:
scl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
sce8116 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
CAN98286
UniProt:
A9FM12
LinkDB
All DBs
Position
complement(11290227..11291036)
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AA seq
269 aa
AA seq
DB search
MRIASWNVNSIRTRLEQLTSWLVRAAPDVVCMQETKVEDGSFPEAALSEVGYRSVIFGQK
SYNGVAIATRFGLSVDDVKKGLDGDEQDVARRMLAATIEGIRVINVYVPNGQAVGTPAFA
YKLAWLERLRSELEARYRPDQQIMICGDFNVAPEAIDVAEPKKWEGQVLFHPDERAALGR
LMEWGLVDAFRACHPAKEAYSWWDYRMGAFRRNKGLRIDLALVTRPLAARCTDVSIDTRP
RELQRPSDHAPVVVEIADGDAPPGVAPGA
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgcgtcctggaacgtgaactccatccgcacgcggctcgagcagctcacgagc
tggctggtccgcgccgcgcccgacgtcgtttgcatgcaggagacgaaggtcgaggacggc
agcttccccgaggccgcgctctccgaggtgggctatcgctcggtcatcttcggccagaag
tcctacaacggggtcgcgatcgccacgcgcttcggcctctcggtcgacgacgtgaagaag
ggcctcgacggcgacgagcaggacgtcgcccggcggatgctggcggcgacgatcgagggg
atccgggtcatcaacgtctacgtgcccaacggccaggcggtgggcacgccggccttcgcg
tacaagctcgcgtggctggagcggctgcggagcgagctcgaggcccgctaccgcccggat
cagcagatcatgatctgcggcgatttcaacgtagcgcccgaggcgatcgacgttgccgag
ccgaagaagtgggaggggcaggtgctctttcatccggacgagcgggccgcgctgggccgc
ctgatggaatgggggctcgtggacgcgttccgcgcctgccaccccgccaaggaggcctac
agctggtgggattaccggatgggcgcgttcaggcgcaacaagggcctccgcatcgatctc
gcgctggtgacgcgcccgctcgccgcgcggtgcaccgatgtgtcgatcgacacgcgcccg
cgggagctccagcgcccgtccgatcacgcgccggtcgttgtggagatcgcggacggcgac
gcgccgcccggggtcgcgccgggggcctga
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