Streptomyces clavuligerus: BB341_10535
Help
Entry
BB341_10535 CDS
T04717
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
sclf
Streptomyces clavuligerus
Pathway
sclf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sclf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BB341_10535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sclf03021
]
BB341_10535
03400 DNA repair and recombination proteins [BR:
sclf03400
]
BB341_10535
Enzymes [BR:
sclf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BB341_10535
Transcription machinery [BR:
sclf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BB341_10535
DNA repair and recombination proteins [BR:
sclf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BB341_10535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
ANW18639
LinkDB
All DBs
Position
complement(2662527..2666009)
Genome browser
AA seq
1160 aa
AA seq
DB search
MAASRNASTANMNNGASTAPLRISFAKIKEPLEVPNLLALQTESFDWLLGNAAWKARVEA
ALESGQDVPTKSGLEEIFEEISPIEDFSGSMSLTFRDHRFEPPKNSIDECKERDFTYAAP
LFVTAEFTNNETGEIKSQTVFMGDFPLMTNKGTFVINGTERVVVSQLVRSPGVYFDSSID
KTSDKDIYTAKIIPSRGAWLEMEIDKRDMVGVRIDRKRKQSVTVLLKALGWTTEQILEEF
GEYESMRATLEKDHTQGQDDALLDIYRKLRPGEPPTREAAQTLLENLYFNPKRYDLAKVG
RYKVNKKLGADEPLDAGVLTTDDVIATIKYLVKLHAGETETIGENGSQIVVETDDIDHFG
NRRLRNVGELIQNQVRTGLARMERVVRERMTTQDVEAITPQTLINIRPVVASIKEFFGTS
QLSQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGFEVRDVHPSHYGRMCPIETPEGPNI
GLIGSLASYGRVNAFGFVETPYRKVVDGQVTDEVDYLTADEEDRFVIAQANAALNDELQF
TEARVLVRRRGGEVDYVLPAEVDYMDVSPRQMVSVATAMIPFLEHDDANRALMGANMMRQ
AVPLITAEAPLVGTGMEYRCAVDAGDVIKAEKDGVVQEVSADYITVANDDGTFTTYRVAK
FSRSNQGTSVNQKVIVSEGDRVIESQVLADGPATEDGEMALGKNLLVAFMPWEGHNYEDA
IILSQRLVQDDVLSSIHIEEHEVDARDTKLGPEEITRDIPNVSEEVLADLDERGIIRIGA
EVVAGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGEIGKVIGVRVFD
REEGDELPPGVNQLVRVYVAQKRKITDGDKLAGRHGNKGVISKILPIEDMPFLEDGTPVD
IILNPLGVPSRMNPGQVLEIHLGWLASQGWKVEGNEEWMERLKSIGADEVQPGTNVATPV
FDGAREDEIAGLFENTIPNRDGDRMVLPSGKARMFDGRSGEPFPDPISVGYMYILKLHHL
VDDKLHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKSDDV
TGRVKVYEAIVKGENIPEPGIPESFKVLIKEMQSLCLNVEVLSSDGMSIEMRDTDEDVFR
AAEELGIDLSRREPSSVEEV
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
ttggccgcctcgcgcaacgcctcgaccgcgaatatgaacaacggcgccagcactgccccg
ctgcgcatctcctttgcaaagatcaaggagcctcttgaggttccgaacctcctcgcgctc
cagaccgagagctttgactggctgctcggcaacgccgcgtggaaggctcgggtcgaggcg
gctctggagagtggacaggacgtccccacgaagtccggtctggaggagatcttcgaggag
atctccccgatcgaggacttcagcgggtcgatgtccctgaccttccgggaccaccgcttc
gagcctccgaagaactccatcgacgagtgcaaggagcgcgacttcacctacgccgcgccg
ctcttcgtcacggccgagttcacgaacaacgagaccggtgagatcaagtctcagacggtc
ttcatgggcgacttcccgctcatgaccaacaagggcaccttcgtgatcaacggcaccgag
cgtgtcgtggtgtcgcagctggtgcgctcccccggtgtctacttcgactcctccatcgac
aagacgtccgacaaggacatctacaccgccaagatcatcccgtcccggggtgcctggctg
gagatggagatcgacaagcgcgacatggtcggtgtccgtatcgaccgcaagcgcaagcag
tccgtcacggtgctgctcaaggccctcggctggacgaccgagcagatccttgaggagttc
ggcgagtacgagtcgatgcgcgccaccctggagaaggaccacacccagggccaggacgac
gcgctcctcgacatctaccgcaagctccgtccgggcgagcccccgacgcgcgaggccgcc
cagacgctgctggagaacctctacttcaacccgaagcgctacgacctggccaaggtcggt
cgctacaaggtgaacaagaagctcggcgcggacgagccgctggacgccggcgtgctcacc
accgacgatgtcatcgcgaccatcaagtacctggtcaagctgcacgcgggcgagaccgag
acgatcggtgagaacggttcgcagatcgtcgtcgagaccgacgacatcgaccacttcggc
aaccgtcgtctgcgcaacgtcggcgagctgatccagaaccaggtccgtacgggtctcgcc
cgtatggagcgtgtcgtgcgcgagcgcatgaccacccaggacgtcgaggcgatcacgccc
cagaccctgatcaacatccggccggtcgtcgcctccatcaaggagttcttcggcaccagc
cagctgtcgcagttcatggaccagaacaacccgctgtcgggtctcacccacaagcgccgt
ctgtcggcgctcggcccgggtggtctctcccgtgagcgggcgggcttcgaggtccgtgac
gtgcacccctcgcactacggccgcatgtgcccgatcgagacccccgaaggcccgaacatc
ggtctgatcggctcgctcgcctcctacggccgggtcaacgcgttcggcttcgtggagacc
ccgtaccgcaaggtcgtcgacggccaggtcaccgacgaggtcgactacctgaccgccgac
gaggaggaccgcttcgtcatcgcgcaggccaacgccgcgctcaacgacgagctgcagttc
accgaggcccgggtgctggtccgccgccgcggcggcgaggtcgactacgtcctgccggcc
gaggtcgactacatggacgtctcgccgcgccagatggtgtcggtcgcgaccgccatgatc
cccttcctggagcacgacgacgccaaccgtgccctcatgggcgcgaacatgatgcgtcag
gccgttccgctgatcacggccgaggcgccgctggtcggtaccggtatggagtaccgctgc
gcggtcgacgccggtgacgtgatcaaggccgagaaggacggtgtggtccaggaggtctcc
gcggactacatcaccgtcgccaacgacgacggcaccttcaccacctaccgggtggccaag
ttctcccgctccaaccagggcacctcggtcaaccagaaggtcatcgtctccgagggcgac
cgggtcatcgagagccaggtcctggccgacggccccgccaccgaagacggcgagatggcg
ctcggcaagaacctcctcgtggcgttcatgccgtgggagggccacaactacgaggacgcg
atcatcctgtcgcagcgcctcgtgcaggacgacgtcctctcctcgatccacatcgaggag
cacgaggtcgacgcccgggacaccaagctgggccccgaggagatcacccgggacatcccg
aacgtctccgaggaggtcctggccgacctcgacgagcgcggcatcatccgcatcggcgcc
gaggtcgtcgccggcgacatcctggtcggcaaggtcaccccgaagggtgagaccgagctg
accccggaggagcgcctgctccgcgcgatcttcggtgagaaggcccgtgaggtccgtgac
acctcgctgaaggtgccgcacggcgagatcggcaaggtcatcggcgtccgcgtcttcgac
cgcgaggagggtgacgagctgcctccgggcgtgaaccagctggtccgcgtctatgtcgcc
cagaagcgcaagatcaccgacggtgacaagctggccggccgccacggcaacaagggtgtc
atctccaagatcctcccgatcgaggacatgccgttcctggaggacggcaccccggtcgac
atcatcctcaacccgctgggtgtcccgtcccgaatgaacccgggacaggtcctggagatc
cacctcggctggctcgccagccagggctggaaggtcgagggcaacgaggagtggatggag
cggctgaagtccatcggcgcggacgaggtccagcccggcaccaatgtcgccaccccggtc
ttcgacggcgcccgcgaggacgagatcgccggtctcttcgagaacacgatccccaaccgc
gacggtgaccggatggtcctcccctccggcaaggccaggatgttcgacggccgctccggc
gagccgttcccggacccgatctcggtcgggtacatgtacatcctcaagctccaccacctg
gtcgacgacaagctgcacgcccggtcgaccggtccctactcgatgatcacccagcagccg
ctgggtggtaaggcccagttcggtggccagcgcttcggtgagatggaggtgtgggcgctg
gaggcatacggcgccgcctacgccctccaggagctgctgaccatcaagtccgacgacgtc
accggccgcgtgaaggtctacgaggccatcgtcaagggcgagaacatccccgagcccggc
atccccgagtccttcaaggtgctcatcaaggagatgcagtccctgtgcctcaacgtggag
gtgctgtcctcggacggcatgtccatcgagatgcgcgacaccgacgaggacgtcttccgc
gctgcggaagagctcggcatcgacctgtcccggcgcgagccgagcagcgtcgaagaggtc
tga
DBGET
integrated database retrieval system
