Sphingobium cloacae: SCLO_1004960
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Entry
SCLO_1004960 CDS
T05301
Name
(GenBank) UvrABC system protein C
KO
K03703
excinuclease ABC subunit C
Organism
sclo
Sphingobium cloacae
Pathway
sclo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sclo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SCLO_1004960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sclo03400
]
SCLO_1004960
DNA repair and recombination proteins [BR:
sclo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SCLO_1004960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
HHH_5
UVR
GIY-YIG
HHH_2
HHH
DUF5588
Motif
Other DBs
NCBI-ProteinID:
BAV63536
UniProt:
A0A1E1EZ35
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All DBs
Position
SCLO_1:556051..557970
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AA seq
639 aa
AA seq
DB search
MMSRPQSPDRFHEDKATFTVKGSQPDIEAGVEAIRTTLRTLPTRPGVYRMQDARGDVLYV
GKARVLRNRVANYTQVDRLPRRLQRMVAQTRSMTIVTTNSEAEALLLEAQLIKRFRPPYN
VLLRDDKSFPFILLRDDHAFPRVQKHRGARKYKGRYYGPFASAGSVTRTINALQKLFLLR
SCTDSFFANRSRPCLLYQIRRCSAPCVGRIDDAGYAELVRDAQDFLGGKSTAVQRKLGEA
MQLASDSLDFEQAAVLRDRLKALTFIQGSQAINAEGLGDADIFALATKGGAMCIQAFFIR
GGQNWGHRSFFPVHTAEVAEDEVLASFMAQFYEEVPPPRLILADRAPAECELMAEALSER
TGAKVRIEVPQRGTRTRLIQQAQRNAVEALARRLAETTTQAKILDEMVEVFGLDGVPDRI
EIYDNSHIQGSHALGAMVVAGPEGFRKNAYRKFNIRNPETAPGDDFAMMREVFERRFGRA
QREDPDRDSGEWPDLVLIDGGKGQLSAARATLEEMGIEDVCMIGIAKGPHHGREGREVFH
LPDGREVTFPLNHPVLFYLQRLRDEVHRFAIGAHRQKRSKAITTSSLDDVPGIGPARKKA
LLMHFGTARAVKDAALEDLQRAPGVSKVVARQVYDYFHE
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcgcgtccccaatcccccgaccgcttccacgaagacaaggcgaccttcaccgtc
aagggcagccagcccgacatagaggcaggcgtggaagcgatccgcaccacgctcaggacc
ctgcccacgcgccccggcgtctaccggatgcaggacgcgcgcggcgacgtgctctatgtc
ggcaaggcgcgggtgctcaggaaccgggtcgccaactatacgcaggtcgaccggctcccc
cgccgcctgcaacgcatggtggcgcagacccgctccatgaccatcgtcaccaccaacagc
gaagccgaagcgctgctgctggaagcgcaactcatcaagcggttccgcccgccgtacaat
gtgctgctccgcgacgacaagagcttccccttcatcctgctgcgcgacgaccacgccttc
ccccgcgtccagaagcatcgcggcgcacggaaatataagggccgctattacggccccttc
gccagcgccggatcggtgacgcggacgatcaacgccttgcagaaactgttcctgctgcga
tcctgcaccgacagcttcttcgccaaccgctcccggccctgcctgctctatcagatccgc
cgctgctcggccccctgcgtcgggcggatcgacgatgcgggctatgccgaactggtgcgg
gacgcgcaggacttcctcggcggcaagtcgaccgccgtccagcgcaagctgggcgaagcg
atgcaactggcctcggactcgctggacttcgagcaggcggcggtgttgcgggaccggctg
aaggcgctgaccttcatccagggcagtcaggcgatcaatgccgaagggctgggcgacgcc
gacatcttcgcgctggcgacgaagggcggggcgatgtgcatccaggccttcttcatccgg
ggcgggcagaattggggccatcgcagcttcttccccgtccacaccgccgaggtggcggag
gatgaggtgctggcgagcttcatggcgcaattctatgaggaagtgccgcccccccgcctg
atcctcgccgaccgcgcgcccgccgaatgcgaactgatggcggaggcgctgtcggaacgg
accggcgcgaaggtgcggatcgaggtgccgcaacggggcacgcgaacccgcctgatccag
caggcgcagcgcaacgccgtggaggcgctcgcccggcggctggccgagacgaccacgcag
gcgaagatcctggacgagatggtggaagtgttcgggctggacggcgtgcccgaccggatc
gaaatctacgacaacagccatattcagggcagccacgcgctgggcgcgatggtggtcgcg
gggccggagggtttccgcaagaacgcctatcgcaaattcaacatcaggaacccggagacc
gcgccgggcgacgacttcgcgatgatgcgcgaagtgttcgagcggcgcttcggccgtgcg
cagcgggaggacccggatcgcgacagcggcgaatggccggacctcgtgctgatcgacggc
ggcaaggggcagttgtcggcggcgcgcgcgacgctggaggaaatgggcatcgaggatgtc
tgcatgatcggcatcgcgaaagggccgcatcacggccgggaaggacgcgaggtgttccac
ctgccggacgggcgggaggtgactttcccgctcaaccatccggtcctgttctatctccag
cggttgcgggacgaagtgcatcgcttcgccatcggcgcgcaccggcagaagcggagcaag
gcgatcaccaccagttcgctggacgacgtgccgggcatcggccccgcgcggaagaaggcg
ctgctgatgcatttcggcacggcgcgggcggtgaaggacgcggcgctggaggacttgcag
cgtgcgccgggcgtgtcgaaggtcgtggcgcggcaggtttacgattatttccatgaatga
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