Styela clava (leathery sea squirt): 120326971
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Entry
120326971 CDS
T07291
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3-like
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
120326971
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sclv02000
]
120326971
Transporters [BR:
sclv02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
120326971
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
120326971
NCBI-ProteinID:
XP_039249265
LinkDB
All DBs
Position
Unknown
AA seq
586 aa
AA seq
DB search
MGEGNINRCKKKEKCETTRYPRMTWKRPLEFLMNIVGYTIGLGNIWRFQYLCYKNGGGAF
LIPYFLVAALCGIPLFFQEIAIGQFTKQSCLNAWNIVPAMKGIAYSQLIIAWYFLSYLAV
VMAWITFYLVNSFTTEDLPWSTCDNEWNTDMCLSIAHLENHNTSIAIENVTMNVTSPTNE
FWANHVLRRTDGIHDMGSFTNWRMMLCFLFSWFVSYLCVLKGIRTTGKVAYVTVTAPYIM
ILILLIRGATLDGAASGVWYFITPQLERLADASVWLDAGGQVLFTLGVCFAVLCGLGSYN
EYHTDCYKYSVICVCICCGTSIFIGLVIFCFLGHMAHVHGKDISEVAESGPGLVFEVFPA
GLTLLPLPQVWSIIFFVALFFVAIDTSFGTIEGCVAICEDISPRWYARMGPRLFRMIVCL
IPFLLGIPMLFDGGIYVFELFNLYGNSGICILFVAFCEAAALAWIYGVERFFDDVKSMIG
YYPNVYFRYCYKYFVPAITLLIFSVYCVTYSPVKIGDYTYPEWANAIGWILMLLVIGPIP
LFFLMTLKKEHGTLTERWNRAIESRIKRQEIPINSEEATQLKEEKV
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgggagaaggcaacatcaatagatgtaaaaagaaagaaaaatgtgaaacgacacgatat
ccaagaatgacgtggaagcggccattggaattcttaatgaatatagtgggatacactatc
ggcctcggaaacatttggagatttcaatatctttgctacaaaaatggaggaggagcattt
ctcataccatactttctcgtagcagctctatgtggcatacctttgttctttcaagaaatt
gctattggacaattcacaaaacaaagctgtctcaacgcatggaatatagttccggcgatg
aagggtatcgcttattcacaactcattattgcttggtatttcctcagctatctcgctgtg
gtgatggcttggataacattttatcttgttaattcgttcactacagaagatttaccttgg
tcaacttgcgataatgaatggaatacagatatgtgcctatcaatcgctcacttggaaaat
cataatacttccatcgcaattgaaaacgtaacaatgaatgttacttctccaaccaacgag
ttttgggcaaaccacgtattgaggcgaacagatggaattcatgacatgggtagttttaca
aactggagaatgatgttgtgcttcctattttcttggtttgtcagctatttgtgtgttttg
aaagggatacgaacaacggggaaggtagcgtacgtaacagtcaccgcaccttacatcatg
attctgattcttcttatccgtggagcaacactcgatggagctgctagcggtgtctggtat
ttcatcactcctcaactggaacgcctagccgatgcatcagtgtggttagacgctggagga
caagttctttttactctcggtgtgtgtttcgctgtactttgtgggcttggtagttacaat
gaatatcatacggactgctacaaatattcagttatttgcgtttgcatttgttgtggaaca
tctatattcattggattagtaatattctgctttcttggtcatatggctcatgtgcacggc
aaggacatatcggaagtcgcggaaagcggtcctggacttgtctttgaagtatttcctgct
ggtttaactttattaccattaccacaagtatggtccataatattttttgtcgctctattt
ttcgttgcaattgatacatcgtttggaactatagagggttgtgtcgcaatatgtgaggat
ataagccctcgttggtatgcccgcatgggacctcgattattccgaatgatagtttgtctt
atcccgtttcttcttggtattccgatgctttttgacggtggaatatatgtttttgagctt
ttcaatttgtatggaaacagcggcatttgtatcttgttcgtggcgttttgtgaagctgca
gcactggcatggatttacggcgttgaaagattttttgatgacgttaagtcaatgattgga
tattatcccaacgtttactttcgatactgttacaaatattttgttccagctataactctg
ctcatcttcagtgtatattgtgtaacatattctccagtaaaaatcggtgactatacatac
ccggaatgggcaaatgcgattgggtggatcctcatgctacttgttatcggtccaattcca
ttgttttttttgatgacattgaaaaaagaacacggtacattgacggagagatggaatcga
gccatcgaaagtcgaatcaagcgccaagaaatcccaatcaattcggaggaggccactcaa
ctcaaggaagaaaaagtttag
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