KEGG   Styela clava (leathery sea squirt): 120329436
Entry
120329436         CDS       T07291                                 
Name
(RefSeq) LOW QUALITY PROTEIN: flap endonuclease 1-like
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
sclv  Styela clava (leathery sea squirt)
Pathway
sclv03030  DNA replication
sclv03410  Base excision repair
sclv03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:sclv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    120329436
   03410 Base excision repair
    120329436
   03450 Non-homologous end-joining
    120329436
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sclv03032]
    120329436
   03400 DNA repair and recombination proteins [BR:sclv03400]
    120329436
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sclv04147]
    120329436
DNA replication proteins [BR:sclv03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    120329436
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     120329436
DNA repair and recombination proteins [BR:sclv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     120329436
Exosome [BR:sclv04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   120329436
SSDB
Motif
Pfam: XPG_N XPG_I 5_3_exonuc 5_3_exonuc_N Ribosomal_L29e DUF3231
Other DBs
NCBI-GeneID: 120329436
NCBI-ProteinID: XP_039251996
LinkDB
Position
Unknown
AA seq 358 aa
MGILGLSKLIFDKAPSAVRENSIKNYFGRKVAIDASMAIYQFLIAIRQDGNQLTNDEGEV
TSHLAGLFYRTIRMLDNGIKPVYVFDGKPPQMKSGELEKRKERREEAEKKLAEATEAGEQ
EEVDKFQRRXVKVTKQHMDDCKKLLTLMGVPVVSAPTEAEAQCAXLVKAGKVYATATEDM
DALTFASNRLLRHMTXSEARKMPIQEFTLEKVLQEMEITQEQFIDLCILLGCDYCGSIRG
IGPKRAYDLIKQHKTIERYLXNIDKKKYTVPEDWAFAQARSLFIEPDVSPCDEIELKWKE
PDEEXSSSLCAKKKGFSEDRIRNGIKKLMNSKKQSTQGRLDDFFQVKVSASPAVEKKI
NT seq 1077 nt   +upstreamnt  +downstreamnt
atgggaattctcggtctctcaaagttgatattcgacaaagccccatctgctgtcagagaa
aatagcattaaaaattactttggtcgaaaagttgcgattgacgcttcaatggccatttat
caatttttgattgcaataagacaagatggaaatcaattaacaaatgatgaaggagaagta
actagccatcttgcaggattgttttatcgtacaattcgaatgttagacaatggtataaag
cctgtatacgtcttcgatggtaaacctcctcagatgaagtctggtgagctcgaaaagcga
aaggaaagacgagaggaagctgagaagaaacttgcggaagcaacagaggcaggagagcaa
gaagaagttgacaaatttcaaagacganctgtgaaagtcactaaacagcatatggatgat
tgtaaaaagttacttactttaatgggagtccctgtcgtctctgcaccaactgaagcggaa
gcacaatgtgctnacttggtaaaagctggaaaagtttatgcaacggccactgaagatatg
gatgctctgacatttgcatctaatagacttctacgacatatgacanttagcgaagcaaga
aaaatgccaatacaggaattcactctagaaaaagtgcttcaagaaatggaaattacacag
gaacaattcattgatttgtgtattttacttggttgcgactattgtgggtccattagaggt
attggacctaaacgtgcctatgacctcatcaaacaacataaaacgattgaaagatatttg
nggaatattgacaagaaaaagtacacagtaccagaagattgggcttttgcccaggccaga
tcattgtttattgaacctgatgtttctccatgtgatgaaattgaacttaaatggaaagaa
ccagatgaagaanactcatcgagtttatgtgcaaagaaaaaaggtttcagtgaagataga
attcgaaatggaatcaagaagttaatgaatagtaagaagcaaagtacacaaggccgtctg
gatgacttttttcaagtcaaagtatcagcatcaccagctgttgaaaagaaaatctga

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