Styela clava (leathery sea squirt): 120330475
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Entry
120330475 CDS
T07291
Name
(RefSeq) LOW QUALITY PROTEIN: peroxisome assembly protein 12-like
KO
K13345
peroxin-12
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
120330475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sclv04121
]
120330475
Ubiquitin system [BR:
sclv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
120330475
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pex2_Pex12
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
Prok-RING_4
zf-rbx1
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
120330475
NCBI-ProteinID:
XP_039253370
LinkDB
All DBs
Position
Unknown
AA seq
372 aa
AA seq
DB search
MADMFSETLQTAVATQEEYQLPSIFEVLAQENLRASVRPAFEHLTKVLASYKPARFGWLL
AWYDEIFTAIELLVQHHFLLAHIASYAEMYYGLRRKIKGLKVQSHNTLGTRRHYLTLVTL
CIIPYIEVKLKKMYDKIADRRETQGNQCTVTIMERLIFRLYPIMFSSWEFWKLYLQFKYA
IHENKYPDPFLKLLRIKLVVEDPQAASQASGNVVSRALTKMIAGGVHAGVFVLQFIDWFM
EHKXITLLFYSGNVVSRALTKMIAGGVHAGVFVLQFIDWFYHDANQATVQKLTQAPIPLP
PHESCDKTIIPVRDNITCPLCNRRRTNDTALSTSGYVFCYVCIFKYVKNNSKCPVTGYPT
TAECLIKIYRPE
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggcggacatgttttctgaaactttacaaacagctgttgcaacacaagaagaatatcaa
cttccttcaatatttgaagttttagctcaagaaaatttacgagcctctgtgagaccagct
tttgagcacttaactaaagttcttgcttcttacaaaccagcaagatttggttggttacta
gcgtggtatgatgaaatcttcacagctattgagcttttggtgcaacatcattttttatta
gctcacattgcatcctatgcagaaatgtattacggcttacgaaggaaaataaaaggttta
aaggtgcaatcacataacacacttggaacaagaagacattatttgaccctggtgactctg
tgtattatcccatatattgaagtgaaattaaagaaaatgtatgataaaattgcggaccga
cgggagacgcagggaaatcaatgcactgtgactattatggaaagactcatttttcgttta
tatccaattatgttctcatcttgggaattttggaaattatatcttcaattcaaatatgca
attcatgaaaataaataccctgatccatttttgaaattattgagaataaaactggttgtc
gaagatccccaagctgcttctcaagcaagcgggaatgttgttagccgagctttgacaaag
atgattgctggtggagtgcatgctggagtctttgttcttcaattcatagactggtttatg
gaacataaatgaataacccttttgttttatagcgggaatgttgttagccgagctttgaca
aagatgattgctggtggagtgcatgctggagtctttgttcttcaattcatagactggttt
tatcatgatgctaatcaagcaacagtgcaaaagttgacacaagcaccgattcctcttccg
ccgcatgaatcatgcgacaaaacaatcattccagttcgggacaacataacttgtccgcta
tgcaacagacggagaacgaatgacactgctctttccacatctggttatgtgttttgttac
gtttgtatctttaagtatgtgaaaaataattcaaaatgtccagtgactggatatcccaca
actgcggaatgtttgataaagatttataggcctgaataa
DBGET
integrated database retrieval system