Styela clava (leathery sea squirt): 120333816
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Entry
120333816 CDS
T07291
Name
(RefSeq) aprataxin-like isoform X1
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
120333816
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sclv03400
]
120333816
Enzymes [BR:
sclv01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
120333816
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
120333816
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
120333816
DNA repair and recombination proteins [BR:
sclv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
120333816
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
120333816
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DcpS_C
FHA_2
zf-C2HE
HIT
FHA
Motif
Other DBs
NCBI-GeneID:
120333816
NCBI-ProteinID:
XP_039257131
LinkDB
All DBs
Position
Unknown
AA seq
393 aa
AA seq
DB search
MLFCSIYSTWFKMLFTMSESKIRRYEICYFEFYYLQMHFKLELLIFLNRNYHIALSLSFS
MYFQCCNSTHAPILLPDGSPVVVGRSAETKISDKLCSRNQLELVANYNQKYVMVKQLGSN
ASQIEGIDIGHRKTDRLHAGQTLHVVDMKYPHKIAICIPNSGTTSSNTKKTKLPQEENTF
SKRQKMTEKVAKNISDEENEANANNKNNSAQKPSYHWSQGLKGSMDDPSLRVSKDDKVVV
IKDKYPKAKYHWLVMPIENIISCAHLRSEHLPLLKHMVKVGEQTIEDNISENDKPKTEFR
YGYHAVHSMSHLHMHVISQDFDSDALKTKKHWNSFTTEYFVDAEDIINEIEKDGKVKNRK
HMADLLKEPLRCHICKRDQKNMPELKKHILKCS
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgctgttttgttctatctattctacatggttcaaaatgctctttacaatgtcagaatcc
aaaatacgaagatatgaaatttgttattttgagttttactatttgcaaatgcatttcaag
ttggaacttcttatttttttaaataggaattaccacattgctttatctctatctttctca
atgtattttcaatgttgcaattcaacacatgctccgatacttctaccagacggttcacca
gtcgtcgttgggagatcagcagagactaaaatatctgataaattgtgttcaagaaatcag
ttggaattggttgcaaattacaatcaaaaatatgttatggtcaagcaacttggcagtaat
gcatctcagatagaagggattgatatcggacatagaaaaactgacagacttcatgcagga
caaacgttacatgtcgttgatatgaaatatcctcacaagattgctatatgtatccctaat
tcaggaactacatcttccaataccaagaaaacaaaactacctcaggaggaaaacacattc
agcaaacgacaaaaaatgactgaaaaagtagcaaaaaatatttccgatgaagaaaacgaa
gcaaatgcaaataataaaaataattcagcacaaaaaccttcctatcattggagtcaaggt
ttgaaaggatcaatggatgatcctagtttgagagtttccaaagatgataaagttgttgtc
atcaaagataaatatccaaaggcaaagtatcattggctggttatgccgatagaaaatatt
atatcttgtgctcatcttagatctgaacatctacctcttctaaaacacatggtaaaggtc
ggtgaacaaacaattgaggacaatatttcagaaaatgacaagccgaaaactgaatttcga
tacggttatcatgctgttcatagtatgagtcatcttcatatgcatgttatcagtcaagat
ttcgattctgatgcattgaagacgaagaaacattggaattcattcactacagaatatttt
gttgatgcagaagatattataaatgaaattgaaaaagatgggaaagtgaaaaatagaaag
cacatggcagatcttttgaaagaacctttaagatgccacatttgtaaacgggatcagaaa
aacatgccagaactgaagaaacacattctgaaatgcagctga
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integrated database retrieval system