Styela clava (leathery sea squirt): 120337228
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Entry
120337228 CDS
T07291
Name
(RefSeq) LOW QUALITY PROTEIN: aryl hydrocarbon receptor nuclear translocator-like
KO
K09097
aryl hydrocarbon receptor nuclear translocator
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
120337228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sclv03000
]
120337228
Transcription factors [BR:
sclv03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
120337228
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_11
PAS_3
HLH
PAS
PAS_9
Per3-like_PAS-A
bHLH_NCOA
HAUS2
Motif
Other DBs
NCBI-GeneID:
120337228
NCBI-ProteinID:
XP_039260886
LinkDB
All DBs
Position
Unknown
AA seq
534 aa
AA seq
DB search
MRMSQADKERFARENHSEIERRRRNKMTAYITELSDMVPSCSALARKPDKLTILRMAVSH
MKQLRGLGGNGLDKPAFLTDQELKHXVLESADGFXFVVSCETGQVTFVSDTVTPVLNQAH
SDWMNHRIYDLIHPQDVAKVQEQMMIEDSSNAGRMLDLKTGAIKKESMLSSEGTRRAFIC
RMRCGKLQVSASEPRYRLAEGHIMEGENIYALTHVTGYIKPWPPSGYNGDELPSRDNGRA
DRTKSIEWXKYCLVGIARLQIPSNSVIGSLAPPNDITEFVSRHNFDNXFTYIDARVSNIL
GYQXRDLIGKRPVDFCHPDDTEKIAESFKQVMQLKGQMFSTICRFQAHNAEYIWLRLSSY
AFQNPYNNEVEYIVSNYSLVKQNQNNHRSVEEQLSSHSRAEQSYIIGSNPSQSPDIQSPT
ATLNYPPQNVSYAAPQSSHYSTTPTGTLAPGWNPVDPSSSDYPHALLDRYQGVIATQHSH
ADIPASNLSYAGFSSDGRQGEYPSQETMMSMLEHGVNNHPHAEFTELFTPFSAS
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgagaatgtcacaagcagataaagagcgattcgctcgtgaaaatcattccgagatcgaa
cgcagacgcagaaacaaaatgacagcgtatatcactgaactctcggacatggtaccgagt
tgtagcgcactcgcacgaaaaccggacaaactgacaatattgcgaatggctgtgtcgcat
atgaagcagttacgtggacttggaggaaacggattagacaaaccagcttttctcacagat
caagaattgaagcatntagtgttagagtcagctgatggatttnctttcgtagtatcgtgc
gaaactggacaagttacgttcgtttctgatactgttactccagtgttaaatcaagcgcat
tctgattggatgaatcaccgtatttatgacctgattcatccacaagatgtcgctaaagta
caagaacaaatgatgatcgaagactcgtcaaacgctggacggatgttggatctcaaaaca
ggagcgatcaagaaagaatccatgctttcaagcgaaggaacacgacgtgcgtttatatgt
cgcatgcgatgcggaaaacttcaagttagcgcttcagaaccgagatatcgtttagctgaa
ggtcatataatggaaggtgaaaatatttatgctctgacgcacgtcacaggctatatcaaa
ccatggccacctagtggttacaatggcgatgaattaccaagcagggataatggacgagct
gaccgcacaaagtcaattgaatggntgaaatactgtttagttggtatcgcaagacttcaa
attccaagcaattctgtgattgggagtctagcgccacctaatgatataaccgaattcgtt
tcaaggcacaattttgataacngttttacatatattgacgcaagagtttcgaatattctg
ggatatcaancgagagacctaatcggaaaacgtcctgtcgatttctgccacccagatgac
acagaaaaaattgcagagagtttcaaacaagtgatgcaactgaaaggacaaatgttttcc
acaatttgtagattccaagcgcacaacgcggaatatatctggcttcgattgagctcttat
gcttttcaaaacccgtataataatgaggttgaatatatcgtgagcaactactctcttgtc
aaacaaaatcaaaataatcacaggtccgttgaggaacagctgtcatcacactcaagagca
gagcaaagttacatcataggttcaaatccaagccagtctccagatatccaatcccctacc
gcgacactaaattaccccccgcaaaacgtatcctacgctgcaccccagagttctcactac
tctacgaccccaactggaactctagccccaggttggaatcctgtcgacccatctagctct
gattacccccatgctttattggatcgctaccaaggtgttatcgcaacgcaacattctcac
gcagatattcctgcgtcaaatctgtcttatgctggattttcttccgatggaaggcaaggg
gaatacccctctcaagagactatgatgtcaatgctagaacatggggttaacaatcacccc
cacgctgaatttacagagcttttcacccccttttctgcttcttaa
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