Styela clava (leathery sea squirt): 120340537
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Entry
120340537 CDS
T07291
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120340537
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sclv03019
]
120340537
03012 Translation factors [BR:
sclv03012
]
120340537
Messenger RNA biogenesis [BR:
sclv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
120340537
Translation factors [BR:
sclv03012
]
Eukaryotic type
Release factors
120340537
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
120340537
NCBI-ProteinID:
XP_039264752
LinkDB
All DBs
Position
Unknown
AA seq
434 aa
AA seq
DB search
MTETETTADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQVSRVAKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTDEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDNKFGFIIMDGNGALFGTLQGNTRDVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETAVQLFITNDRPNVTGLVLAGSADFKTELSQSD
MFDQRLQVKILKLVDVSYGGENGFNQAIELSAEVLSNVKFIQEKKLIGRYFDEISQDTGK
YCFGVDDTLKALEMGAVEILIVWENMDTMRYVLKNHTADDEKILFLRPDQEKDKTHFTDK
DTGVEMEMVESCSLLEWFANNYKRFGSTLEIVTDRSQEGSQFVKGFGGIGGMLRYRIDFH
SMEFTEDDDLYDEY
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaactgaaacaactgctgatcggaatgttgaaatctggaaaatcaaaaagcta
atcaaaagtttagaggctgctcgtggaaatggaacaagcatgatttcattaatcattccg
ccaaaagaccaagtatctagagtggcaaagatgttagcagatgaattcggcacggcatct
aatattaagagtagagtgaacagactatctgtgctcggagcgattacctccgtacaacaa
agactcaaactttataacaaagttccaccaaatggtcttgttgtatactgtggtactatt
gtaacagatgaaggaaaagagaaaaaagttaacattgattttgaaccattcaaaccgatc
aatacgtccctttacctgtgcgataataaatttcataccgaagctctgacagctctactt
tccgacgataacaaattcggattcattatcatggatggtaacggcgccctttttggtacc
ttgcaaggaaataccagagatgtattgcataaattcacagttgatttgcccaagaaacat
ggtagaggaggtcagtctgcacttcgttttgctcggctaagaatggaaaaaagacacaat
tatgtacgaaaagtggcagaaactgcagttcaattatttatcacgaatgatcgtcctaat
gtaactggccttgttttagcgggttcagcagatttcaaaacagagttgagtcaatcggat
atgttcgatcaacgattacaagttaaaattctgaagcttgtcgatgtttcttatggcgga
gaaaatggattcaatcaggctattgaattgtccgcagaagttttgtctaatgtcaaattt
atacaagagaagaaactaattggaagatattttgatgagatttcacaagatactggaaaa
tattgcttcggagttgatgatactttaaaagcactagaaatgggtgcagtagagatattg
attgtttgggaaaatatggacacaatgcgttatgtattgaagaatcatactgctgacgac
gaaaagattttatttctcagaccggatcaagaaaaagacaaaacacattttacagataaa
gatacaggagtggaaatggagatggttgaaagctgctcgttattagaatggtttgccaac
aattacaaaaggtttggttccactttggaaatcgttactgatcgatcacaagaaggttcc
cagtttgttaaaggatttggcggtattggtggaatgctgaggtatcgcatcgattttcat
agcatggaatttactgaagatgatgatctatatgacgaatactaa
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