Styela clava (leathery sea squirt): 120346721
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Entry
120346721 CDS
T07291
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 2-like
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
sclv
Styela clava (leathery sea squirt)
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sclv01009
]
120346721
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sclv03019
]
120346721
Protein phosphatases and associated proteins [BR:
sclv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120346721
Messenger RNA biogenesis [BR:
sclv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
120346721
mRNA cycle factors
Stress granule specific factors
120346721
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-GeneID:
120346721
NCBI-ProteinID:
XP_039272462
LinkDB
All DBs
Position
Unknown
AA seq
486 aa
AA seq
DB search
MEAIINNIAETQPGTDLDKPTSPVAVIQELGKSRSLKPVFQIIKEEGPPHETNYEVMLTL
GNYTWQGEGRSVKKAQFDASRKALEELGYPLPRRSTKKTKIANPASLTPTVILNGLAMAR
GETVKYAVVKTTPLPCQPIYNKTTNWQQHDPLNWAPKMYYGADLKQPQPYSNGSFQTGID
FQKYNGKPIKRWIHPQLFRVEVIVGERSFFGEGKTQQAARHDAAQHALDVLQTMPVPIKE
KKSADTKNGENSDNGTKIALEKSPISLLYEKASNHGLKVDFTVTSEEGPPHLKLFTMNIK
VFKSSDEIVTMADAQGPNKHTAKKKSASAALEKLQNLSLPEKKSKNSRNSRSNIKKDSET
KIADILVSKSAMHPISRLTQILQAKKESLPVYSIVSFTKDNHLTYFCIKCAVGSHEATGD
GKSKKEAKRNASENMLKLLGFDIREQTESIIKVDSVQKNGPKLTIAQQRKLKNKPTEPEI
LPTLPE
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggaggccatcataaataatatagctgagacacaaccaggcacagatttggataaacca
acttctccagtggctgttatccaagaactggggaaaagtagaagcctaaaaccagttttt
cagatcatcaaagaagaaggccctccacatgaaacaaattatgaagtgatgttaactctt
ggcaattatacatggcaaggtgaaggtagaagtgtcaagaaagcacagtttgacgcgtct
agaaaagcgctggaagaactcggttatcctttaccgaggagatcaacaaagaaaaccaaa
atcgctaatccggcttcattaacaccgactgtgatattgaatggacttgcgatggctagg
ggtgaaacagtcaagtacgcagttgttaagacaacacctttgccttgccagcctatatat
aacaaaacaactaattggcagcaacatgatccgttgaattgggcacccaaaatgtattat
ggtgctgatttgaagcaacctcaaccatacagcaatggatctttccaaacaggaattgat
tttcagaaatataatggcaaacctatcaaacgttggatccatccccaactttttcgtgtc
gaggtaattgtgggcgaacgatcattttttggagagggcaaaacacagcaggcggcacga
catgatgctgcacagcatgcacttgatgttttacagacgatgccagttcccataaaagaa
aagaaatctgcggatacaaaaaatggagaaaatagtgataatggaactaaaatagctttg
gaaaaatctccaataagtctgctatatgaaaaagcttcaaaccatggtttaaaagtagat
ttcactgtgacatcagaagaagggccaccgcacttgaagcttttcaccatgaatataaaa
gttttcaagtcctcagatgagatagttactatggcggatgcgcaaggaccaaataaacat
acagcaaagaaaaagtctgcatcggctgctctagaaaaacttcaaaatttatctttacca
gaaaagaaatcaaaaaattccagaaattcaagaagcaatataaaaaaggattcagagaca
aaaattgcagatattcttgtatcgaaatccgcaatgcatccaatcagtcgactcacgcaa
attttacaggctaagaaagaatctttaccagtctactctatcgtgtcattcacgaaagac
aatcatttgacatacttttgcattaaatgtgctgtaggcagtcatgaagcaactggtgac
ggtaaaagtaaaaaagaagcaaaacgaaatgcttcagaaaacatgctgaaacttttagga
tttgatatccgagaacaaactgaatccataattaaagtagattctgttcaaaagaacgga
ccaaaactcactattgctcaacaaagaaaacttaaaaataagccaactgagcctgaaata
ctaccaaccttacctgagtga
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