Styela clava (leathery sea squirt): 120347508
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Entry
120347508 CDS
T07291
Name
(RefSeq) rap guanine nucleotide exchange factor 2-like isoform X1
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
sclv
Styela clava (leathery sea squirt)
Pathway
sclv04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sclv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
120347508
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
RasGEF
PDZ
RasGEF_N
cNMP_binding
PDZ_6
RA
PDZ_2
RA_2
Ufm1
Cas_APE2256
Motif
Other DBs
NCBI-GeneID:
120347508
NCBI-ProteinID:
XP_039273455
LinkDB
All DBs
Position
Unknown
AA seq
2359 aa
AA seq
DB search
MSMFNRDEAFICALKKNPNQRTNKDLEIIFSRLHRFEALSNLREQGLKKLCAEVRYEWHD
SNEILYGKDDPCTCWFILLSGSIFIQGSMFLRNTSFGKRIPGTTSRGCQCLVLEPSEMIA
IDYPEMHPPLHTVRVPDLRNHSTSSKSTLDSVAEANSSSVESSPKQNVSRKSSGTMANGQ
VQTDNTSDISKDSREYYINQEDSRSQDDPEQDDEDFLEEQEDSISLHSSSSFVIKDLVTD
VLKKDISERNEDDHDVLLEFTRSLQAFSNMTEPTRRELCKVMVFAHVDKAGTELLKDNEA
LDSWSVIINGQVQIVYPDSDENNDTLLYMGESFGVTPSMQTQYHKGTMYTMVDDCQFLCI
AQEDYCNVLHQGKENMENIMGEDGVVEMVKEKREIEGGRKGHIVIRGTPETLRAHLLEEN
SIDTTYAEDYLLTYRAFSNEPIKICNQLLEWFDREEFQAKVTRVILLWVNNHFNDFERDR
HMMNLLEKFEEKLQTCNKTGQCKLFNIACSTKAKSKIITLSRSSNEEDLGFSITGGTDGY
PIYILKVTANSVAEEKGLKRGDQLLNVNGQNFEKLNMERANAILRKNTDLTLTVKTNLFA
FKEMMADIKNPQKKREKAKKGKHENTPVIAQISTMQPTKASRMPSITSEAEAFDGKTKKG
AGTLGRRALNKVNRVRSKMFQTKRDPSFREYLDQHGGMISETDAVAKDDSFLSALKNTKY
QPGSAATVDGPRSFRQAAAHSSSNPDLLDPGCYVGAENPSLAEVPEDVIKVFRADQTYRF
VFVNQDTTAEEAVRAACKEFGIAADSSKNYSLCRVTVQNETFVKQSKLPDTWSKLSEIPL
SARYYLKNNMESEQLLPDENIPELLKEANYTFLDLNCFEVALHLTLQDYERFKTVEQTDF
IDDLFHLNEESLTNFKSFEDLVNRELFWVVSTLCLEPNLLRRSKMLKHFTKIAHHCKALK
NLNSTFAIISGLGYRAVSRMKASWEKVPAKVQRTFDDLQSLMDPSRNMSKYRTLLNELAA
QPPALPYIPVVKKDLTFLHLGNDTKVDDLVNFEKMRMIGREVRNVCRLCSADSSQIISSA
IAHNHEADRPSSNIYHTLTRKGRRSSFNNARKMYEDAVNARRVKQYMQQLDIEKDEDKLM
EMSKQVEPSSVSSAQTKRRNAGSADSPSRSSKTLPGGQGLSANAAKRSQGRNNSEPQIPV
VPGMITQQNARKKNPVSSFPKFGTTSPQAIRKLLALSEESGDGGSSGSSKRGSLEQRRSG
SASSRELSPATSPYLSPRRDRDVTRSKGSISSSDSGHSVAHENSNRNNNKGRHDLSSSVS
RASIQSKHLSHPPALASHSNSSSARSSIASSSSLGISSTSLNAPGLSSSSSSHSLSPRSS
PNHIMASRGTHSKSHHSTFRNSPVRSSSSSSADTIKSTGHGRPVSDRPVIMQGRSGSFGA
LSVTTVKSERLIPPGSSERKMTGSSSSPSLSVRAAASQHHLILPNQFNPQLPRSPSMDSG
VVSMGSLSADSTRFLNSDPGEIFQRPAHRSTVSLLSSEGFASQQSLQHIQGEGNSQSPVM
RRHLRNMQHKQDDASKGNSRLSEGADGCVSATTQRIVPGGPGATPPRVTTSQTENEGTDD
IKQTFLSGSRGWGDAPLMRDKDPWPIEAMMPPGVAMPPLGWSSQTSADNMSSVGLNRSEF
PRNQSQKTIPNSPLSREFKGGGGDSVDGTMQYSPKKRAVSGTGAEIQQYYERLRLQERPN
PPSTLNFRMGPSRSCDAKTPEAILEEKLLLELQQQKPRLNKSFDSASSSVYYQSRNGRNQ
VPLCERHSASFGGLPPGYHDSSSTPGTPVSSNLPMMHQLSLDSSDPSIRNSGMKGNFPSE
YSNYPCSGNVCTKPGCKCPASRSIQEQPNSAAIKRGFEFTSPGRTSSPKQNALPPDMRSK
VPFRRDGENMYMSDFGNPDPRTFVRARPDQGMYPNRDNIRMSEEDNVSGPFHCPKHGSPY
INQHAGAHYKTSSPQAFHGLPEFSSLPLPPPLSGTPDAPEMHYRVDPRYNYRHQNHMNDI
SEKHVIAHTRSSSDISLHSSGYEFADSNTQNTSLKSIDNGQMYPSPIDSYVDSPRLKGGY
YRDSPNETPQSLQTSRNSLSNVSINSTPKLHNSSANPPVRRKSSEWAVTDLDKENNQQAM
QVWTSSSSSTINASNDSSIGGKSNTSTPSKDQPPPTQTVQKRKKPPPPLPPQRNSSYGAT
RQLRLSSSTLSPLSSPPNSPTTPMAMMKISLSETHPQLVVKTMVNGPNLNSSDVPQTTRS
KPLVQSNGVVPNMTQSNMIRKDTSFHSESSFTSGRTLPSYNEAMNHISLQSSFSPSNSNL
PSYQNYQDMRETKEQTSQV
NT seq
7080 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgtttaatcgagatgaagcttttatctgcgctctcaaaaagaacccaaaccaa
agaacaaacaaggatcttgagatcatcttttctcgactacaccgatttgaagctctttca
aatttgagagaacaaggtctcaaaaaactttgtgctgaagtgagatatgaatggcatgat
tcaaacgagatactatatgggaaagatgatccttgtacctgctggtttattttgttgtct
ggatccatatttattcagggctctatgtttctacgaaacacaagttttggtaaacgtata
cctggaactacatcaagaggttgccaatgccttgttcttgaaccatctgaaatgattgca
attgactaccctgaaatgcatccacctttacacacagtacgtgtaccggatttacgaaat
cacagtacaagttcaaaaagtacattggacagtgttgctgaagcgaatagctcatcagtt
gagagttctcccaagcaaaacgtctcacgaaagtccagtggaacaatggctaatggacaa
gtacaaacagacaatacttcagacattagtaaggattctcgggaatattatataaatcaa
gaagattccagaagccaagatgatcctgaacaagatgatgaagattttttggaggagcag
gaggatagcatctcactccattcatcttcttctttcgtcatcaaggatcttgtaacagat
gttttaaagaaggatatatcagaacgaaatgaggatgaccatgatgtccttctggaattc
acacggagtttgcaagcattctcaaatatgacagaaccaacaagaagagagttatgtaaa
gttatggtctttgcacatgtcgacaaagccggtactgaattattgaaagacaatgaagct
cttgattcatggtctgtcatcatcaatggacaagttcaaatcgtatatcctgatagtgat
gaaaataatgatacattattatatatgggcgaaagttttggggttacacccagcatgcag
acccaatatcacaagggtacaatgtacactatggtcgacgattgccagttcctctgtata
gcacaagaagactattgcaatgttctccaccaaggcaaagagaatatggaaaatattatg
ggagaagatggcgtagtagaaatggtcaaagaaaaacgtgaaatcgaaggtggaaggaaa
ggtcatattgtcatcaggggaactccagaaacattacgtgctcatttgttagaagaaaat
tcaatcgataccacttatgcagaagactacctccttacatacagagctttttctaacgaa
ccaataaaaatttgtaatcagttattagaatggtttgacagagaagaatttcaggccaag
gtgacaagagtaatattactctgggtcaacaatcattttaacgactttgaacgcgatcga
cacatgatgaacttacttgaaaaatttgaagaaaaattacaaacgtgcaataaaacagga
caatgtaaattgttcaatattgcttgctcaactaaagcaaaatccaaaatcataacactg
tcacgatcatcaaatgaagaagatcttggtttcagcataacaggaggtacagatggttat
cctatttatatattaaaagtcaccgctaactcagtcgcagaagaaaaaggtttaaaaaga
ggtgaccaacttctcaatgtgaatggacaaaattttgaaaaactcaacatggagagagca
aacgcaatattacggaaaaacacagatttaactcttactgtaaaaactaatttatttgcc
ttcaaagaaatgatggcagacattaaaaatccccaaaagaagagagaaaaagcgaaaaaa
gggaaacatgaaaacacaccggtgattgcacagatttcaacaatgcaacctacgaaagca
tctcgaatgccatctataacatctgaagccgaagcattcgatggaaaaactaagaaagga
gctggcacgcttggcaggcgagccttgaataaagtgaatagagtacgaagtaagatgttt
caaacaaaaagagatccatcgtttcgagaatatctcgatcagcacggtggaatgattagc
gaaacggatgctgtcgccaaggatgattcatttttgtcggcattgaaaaacacaaaatat
cagcctggttctgccgccactgtagatggaccacggtcatttaggcaggctgctgcacac
agttcaagcaatccagatttacttgatcctgggtgttatgttggagcggagaatccgtca
ctggcagaagttcctgaagatgtcatcaaagtattcagagctgatcagacgtacagattt
gtttttgtaaatcaagatacaacagcagaagaagctgtgagagcggcttgtaaagaattt
ggaattgcagccgatagttcaaaaaattattcactctgtcgagtaacagttcaaaatgaa
acattcgttaaacaatcaaaactaccagatacttggtcgaaattatcagaaataccatta
agtgcaagatactatttgaaaaataacatggaaagtgaacagttacttccagatgaaaac
attcctgaacttttgaaagaagcaaattatactttcctcgatttgaattgctttgaggtt
gctcttcatttaacacttcaagattatgaacgtttcaagactgtggaacaaaccgatttc
attgatgatttgtttcatttgaatgaggaaagtttgacaaacttcaagtcttttgaagat
cttgtgaatcgggaattgttctgggtcgtatcaactctttgtttggaaccaaatttatta
agaagatcaaaaatgttaaaacattttacaaagattgctcatcattgtaaagcgttgaaa
aatctcaactcaacttttgcaatcataagtgggctcggatatagagctgtatcacgtatg
aaagcttcgtgggaaaaagttccagctaaagtacaaagaacatttgatgatttacaatct
cttatggatccgtcacgaaatatgtcaaaatatcgaacattattgaatgaactagcagca
caaccacctgcattaccatatatccctgtcgttaagaaagatttaacgttcttgcatttg
ggaaatgatacaaaagttgatgatctggtcaattttgaaaaaatgagaatgataggacgt
gaagtacggaacgtatgtcgactttgttccgctgattcgtctcagattatttccagtgca
attgcacacaatcatgaagcagatagaccgtcatcaaatatttatcacacattaacgaga
aaaggtcgtaggtcatcattcaataatgcgagaaagatgtatgaagatgccgtcaatgca
aggagagtgaaacaatacatgcaacaactcgacatagaaaaagatgaagacaaattgatg
gagatgtcaaaacaagtcgaaccatcttctgtgtcatctgctcaaacaaagagacgaaat
gctggatcagcagattccccttcaaggtcatcaaagacattacctggcggacaaggattg
tcggcaaatgcagcaaaacgttcgcaaggtcgcaacaattcagaaccacagattccagtt
gttcctggaatgattacacaacagaatgctcgcaagaagaatccagtctcgtcttttcca
aaatttggcacaacatcacctcaagctatcagaaaattacttgcactttccgaagagagc
ggggatggtggttcatctggaagtagcaagcgcggctcgctggaacaaagacgtagcggc
tctgccagcagtcgtgaactttcacctgccacttcaccgtatttgtctcctagaagagac
agagatgtgacaagatctaagggaagtataagcagcagcgacagtggacacagtgtggct
cacgaaaattcaaatcgaaacaacaataaaggacgacatgatttatcttcttccgtctct
cgagcatcgattcaatctaaacatctttctcacccacctgcactcgcttctcactcaaac
tcatcgagtgctagatcgagtatagcgagttcctcaagcttggggatttcatccacttca
ctcaatgctcccggtctttcatcatcttcctcgagtcactcactcagtcctcgctcatca
ccgaatcacatcatggcatctagaggaacacactcaaagtctcatcattcgacatttcgt
aacagcccagttaggtcaagttcaagttcatctgctgacacaattaaatcaacaggccat
ggtcgaccggtttctgatcgtccagttatcatgcaaggtcgaagtggatcattcggtgct
ctttctgttacaacagtgaagtcagaaagacttattccaccgggtagttcggaacgaaaa
atgactggatcttcatcatcgccctcactctccgtacgagcagcagcgagccaacatcat
ttgattttaccaaatcaatttaatcctcaactaccgagatctccgagtatggatagtggt
gtggtcagtatggggtcactctctgccgattctacacgttttttgaactccgaccccggt
gaaatatttcaaagacctgcgcaccgaagcacagtcagtcttttatccagcgaagggttt
gccagtcagcaatcacttcaacatatacagggtgagggtaatagtcaaagtccagtgatg
cgacgacatttacgtaacatgcaacataagcaagatgatgcatctaaggggaatagcaga
ttgtcggaaggagccgacggttgtgtaagcgctactactcaaagaattgttccaggtgga
ccgggagctacccctcctagggtcactacttcacaaaccgaaaacgagggtacagatgac
attaaacagacttttttatctggatctaggggttggggggatgccccgctaatgagagat
aaagatccctggccgatagaagccatgatgccaccaggagttgcgatgccgcctttgggc
tggtcatcgcaaacttctgctgacaacatgtcttctgttggtcttaaccgcagcgaattt
ccaagaaaccagtcacagaaaacaattccgaactctcctttgtcgagagaattcaaaggt
gggggtggggattctgtcgacggaacaatgcaatattcaccgaagaaaagagctgtttct
ggaacaggagctgaaatacaacaatactatgagcgattgagactacaagagcgtccaaat
ccgccatcaacactgaattttcgtatggggccttcacgaagttgtgatgcaaaaacaccc
gaagcaattttagaagaaaaattacttctcgagttgcaacaacaaaaaccgagattaaat
aaaagtttcgacagcgctagtagctctgtgtattatcagtctcgaaatggtcgcaaccaa
gtcccactgtgcgagaggcattcagcatcattcgggggtctacctcctgggtaccatgac
agttcaagcaccccaggtactccagtctcgtcaaaccttcccatgatgcatcagttgagt
ttggatagctcggatccatcaatacgaaattcaggaatgaaaggaaattttccttcggag
tattcaaattatccatgttcaggaaatgtatgtacgaaacccggatgtaaatgccctgct
tctcgttctatacaagaacaacccaactcagccgctatcaaaagaggtttcgagttcact
tctcctggcagaacttcatcacctaaacagaatgctttaccacctgatatgcgtagcaaa
gttccgtttcgaagagatggtgaaaatatgtacatgtctgattttggcaatcctgatcca
agaacattcgtcagagcacgtcccgaccaaggcatgtatcccaacagagacaatatcaga
atgtccgaagaagataacgtttccggtccgttccactgtccaaaacatggaagtccttat
attaaccagcatgcgggggctcattacaaaactagtagtccacaagcatttcacggtcta
ccggaattttctagcttgccgcttccgcctccgttgagtggaacacctgatgcacccgaa
atgcattacagggttgacccacgttataattacagacaccaaaatcatatgaatgacatt
tccgagaagcatgtaatagcccacacacgaagttcaagcgatataagtctgcattcgagt
gggtatgaattcgcagactcgaatactcaaaacacttcattgaaaagtatagataatggt
caaatgtatccgagcccgatagatagttatgtggatagtcctcgtctaaaaggtggatat
tacagagattctcctaatgaaacaccacaatcattacagacaagtcggaattctttgagc
aatgtttctattaactcaacaccaaaattacataattcttctgccaatccacccgttcgc
agaaaatcaagcgagtgggccgtcactgatttagacaaagaaaataatcaacaagcaatg
caagtttggacaagcagttcttcatcaactataaatgcatcaaacgattcatctatcggt
ggtaaaagcaatacatcaacgccatctaaagatcaacctcccccaacacagactgtacag
aaaagaaagaagccgcctcctccacttcctccccaaagaaactcgagttatggtgccaca
cgacaacttcgtctcagtagcagtacgttatcaccattatcatcaccaccaaactcaccc
acaacaccaatggctatgatgaaaatatctctgagtgagacacatcctcaattagttgtt
aaaacaatggtgaatggaccgaatcttaattctagcgatgttccacaaacaacacgatca
aaacctcttgtgcaatcgaatggcgtagttccgaacatgacacagagtaatatgataagg
aaagatacatcttttcattcagaatcgtcattcacttctggaagaactttaccatcttat
aatgaagctatgaatcatatttcactgcagtcatctttttcaccatctaattccaattta
ccgagttaccaaaactatcaagatatgagagagactaaggagcagacgtcacaagtgtga
DBGET
integrated database retrieval system
