KEGG   Schizophyllum commune: SCHCO_02631046
Entry
SCHCO_02631046    CDS       T01331                                 
Symbol
SCHCODRAFT_02631046
Name
(RefSeq) Sm-like ribonucleoprotein
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
scm  Schizophyllum commune
Pathway
scm03018  RNA degradation
scm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:scm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SCHCO_02631046 (SCHCODRAFT_02631046)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SCHCO_02631046 (SCHCODRAFT_02631046)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:scm03019]
    SCHCO_02631046 (SCHCODRAFT_02631046)
   03041 Spliceosome [BR:scm03041]
    SCHCO_02631046 (SCHCODRAFT_02631046)
Messenger RNA biogenesis [BR:scm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     SCHCO_02631046 (SCHCODRAFT_02631046)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     SCHCO_02631046 (SCHCODRAFT_02631046)
Spliceosome [BR:scm03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    SCHCO_02631046 (SCHCODRAFT_02631046)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 9588518
NCBI-ProteinID: XP_050199148
LinkDB
Position
Unknown
AA seq 129 aa
LPLSLLTAAQNKPMLVELKNGETFNGHLVNCDNFMNITLREVYQTNADGDKFWKLKECYI
RGSTIKYLRIPDELLDQVKDEQIRAREAGRAARGAHPGQRGRGGPQARGGGRGRGQIMRG
GPRGRGRGQ
NT seq 390 nt   +upstreamnt  +downstreamnt
ctcccgctctccctcctcacggcggcgcaaaacaagcccatgctcgtcgagctgaagaac
ggcgagacgttcaacgggcacctggtgaactgcgataacttcatgaacatcacgctgcgc
gaggtgtaccagacgaacgcggacggggacaagttttggaagctgaaggagtgctatatc
cgcgggagcacgatcaagtacctccgcataccagatgagctgctcgatcaagtgaaggac
gagcaaatccgcgccagggaagccggccgcgcagcgcgcggtgcccatccaggccagagg
ggacgcggcggacctcaggcgcgcggaggaggacgcggacgcggtcaaatcatgcgcgga
ggtccaagaggtcgtggacgagggcaatag

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