Schizophyllum commune: SCHCO_02640393
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Entry
SCHCO_02640393 CDS
T01331
Symbol
SCHCODRAFT_02640393
Name
(RefSeq) TPR-like protein
KO
K12869
crooked neck
Organism
scm
Schizophyllum commune
Pathway
scm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
scm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SCHCO_02640393 (SCHCODRAFT_02640393)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
scm03041
]
SCHCO_02640393 (SCHCODRAFT_02640393)
03036 Chromosome and associated proteins [BR:
scm03036
]
SCHCO_02640393 (SCHCODRAFT_02640393)
Spliceosome [BR:
scm03041
]
Complex B
Other components
Prp19-related factors
SCHCO_02640393 (SCHCODRAFT_02640393)
Complex C
SCHCO_02640393 (SCHCODRAFT_02640393)
Chromosome and associated proteins [BR:
scm03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
SCHCO_02640393 (SCHCODRAFT_02640393)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
HAT_PRP39_N
HAT_PRP39_C
TPR_14
TPR_19
HAT
Suf
TPR_2
TPR_16
TPR_17
TPR_CcmH_CycH
SNAP
TPR_12
TPR_11
TPR_9
Mad3_BUB1_I
U3_assoc_6
DUF7179
Motif
Other DBs
NCBI-GeneID:
9597907
NCBI-ProteinID:
XP_003027486
UniProt:
D8QGZ8
LinkDB
All DBs
Position
Unknown
AA seq
738 aa
AA seq
DB search
MQDGRAPRIKNRAPAAIQITAEQLLREAQERQESAFRAPKQRVEDFEELHEYRGRKRKEF
EERIRRTRGSIKEWLQYANWEASQNEFDRARSVYERALDVDPRSIQLWLSYTEMELKARN
VNHARNLFDRAVTLLPRVDQLWYKYVYLEELLQNVPGARQVFERWMQWEPDDKAWQAYIK
LEERYNELDRASAIYERWVAVRPEPRVWVKWGKFEEERQRVDKAREVFQTALEFFGDDEE
QIEKAQTVFNAFAKMETRLKEYDRARVIYKFALERIPRSKSSSLYASYTKFEKQHGTRRT
LENTVLGKRRIQYEEELSQDGRNYDVWFDYARLEEGAYAEVKEEAGTAEEEEAAANRVRE
VYERAVAQIPPGGEKRHWRRYIFLWLYYALFEEIETKDYDRARQIYETAIRVVPHKQFTF
AKLWLMFAKFEIRRLNLPQARKILGTAIGMCPKEALFKGYIELEKDLREFDNVRKLFEKS
IEYDPSNSAAWIKYAEIETQLQDFARARAIFELGISQSALTMPELLWKKYIDFEVEEGER
ENARALYERLVGISGHVKVWISYALFEAEPIPIPRADREDEDEEDDEAEVPTVPGDADRA
RQVFDRAYKDLKSKGLKSERVALLEVWKTFEEQHGSEEDIKKVQGMMPIVSKRRQVDQET
GQTVEDWDLVFADDEREANPTSFKFLQMAHAWRAAQEAQKNGGDAPGGPLPGFAPASKPQ
APAEPPSPTASSNAGSDE
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacggacgagcgcctcgaatcaaaaaccgcgccccagcggcgatacagatcacc
gccgagcaacttctgcgcgaagctcaagagcggcaagagtccgctttccgcgccccgaag
cagcgcgtcgaagacttcgaggaactacatgaatatcgcggtcgaaagaggaaagagttc
gaggagcgtatacggaggacgagggggagcatcaaggaatggctgcaatacgcaaactgg
gaggccagccagaacgagttcgatcgcgcacgctccgtctacgagcgcgctctggacgtg
gacccgcgctccatccaactatggctctcctacaccgagatggagctcaaggctcgcaac
gtcaaccacgcacgcaacctgttcgatcgcgccgtaaccctcctcccccgcgttgaccag
ctctggtacaagtacgtctacctggaggagctgctgcagaatgtccccggcgcgcgacag
gtcttcgagcgctggatgcagtgggagccggacgacaaggcgtggcaggcgtacatcaag
cttgaggagcgctataatgaactcgatcgcgcgagtgcgatttacgagcgctgggttgcc
gtccgcccagaaccgcgcgtatgggtcaagtggggcaagttcgaggaggagcgccagcgc
gtagacaaggcgcgcgaggtattccagactgcgctcgagttcttcggcgacgacgaggag
cagatcgagaaggcgcagaccgtcttcaacgcgttcgccaagatggagacccgtctgaag
gagtacgaccgagcacgcgtgatctacaagttcgcacttgagaggataccgcgctcgaag
tcaagttcgctgtacgcgtcgtacacgaagttcgagaagcagcatgggacccgccgcacg
ctggagaacactgtccttggcaaacgtcgaatccagtacgaggaagagctatcgcaagac
ggccgaaactacgacgtctggttcgactatgctcgcctcgaagagggcgcgtacgcggaa
gtcaaagaggaggcgggcacagcagaagaggaagaggctgctgcgaatcgcgtccgggaa
gtgtacgagcgcgcggttgcgcaaataccacccggcggagagaagagacattggcggcga
tacatcttcctatggttgtactacgccttgtttgaggagatcgagacgaaggactatgac
cgtgcacggcaaatctacgagacggccatacgtgtcgttccccacaagcagttcaccttt
gcgaagctctggcttatgttcgcgaagttcgaaatacggcgactgaacttaccacaagcg
cggaaaatccttggtactgccatcggcatgtgcccaaaggaagccctcttcaaaggttac
atcgagctcgagaaggacctccgcgagttcgacaacgtccgcaagctcttcgagaagtcc
atcgaatacgatccctcgaactcagccgcctggatcaagtacgccgagatcgagacgcag
ctgcaggacttcgcccgcgcgcgtgcgatcttcgagctcggcatctcccagagcgcgctc
accatgccagagcttctgtggaagaagtacatcgacttcgaggtcgaggagggcgagcgc
gagaacgcgcgcgcgctgtacgagcgccttgtgggtatcagcgggcacgtcaaggtctgg
atatcgtacgcgctgttcgaggccgagccgatacctataccgcgtgcggatcgggaagac
gaagacgaggaggacgatgaggcggaggtgccgacggtgccgggtgacgcggacagggcg
agacaggtgttcgaccgcgcgtacaaggacttgaagagcaagggcctcaaaagcgagcgt
gtcgcccttctggaggtctggaagacgttcgaggagcagcacggcagcgaggaggatatc
aagaaggtgcagggcatgatgcccatcgtcagcaagcggcgccaggtcgaccaggaaacc
ggccagacggtcgaggattgggaccttgtctttgccgacgacgaacgcgaggcgaacccc
acgtcgttcaagttcttgcagatggcgcacgcgtggcgcgccgctcaggaagctcagaag
aacgggggcgatgcaccgggggggccgttgcccggtttcgcgccggcttccaaacctcag
gcaccagcggagccgccgagcccaacagccagctcgaacgctggaagcgacgagtaa
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integrated database retrieval system
