Streptomyces coralus: QU709_33725
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Entry
QU709_33725 CDS
T09650
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
scoa
Streptomyces coralus
Pathway
scoa00040
Pentose and glucuronate interconversions
scoa01100
Metabolic pathways
scoa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
scoa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
QU709_33725
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
QU709_33725
Enzymes [BR:
scoa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
QU709_33725
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
WLW56004
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Position
7547775..7549097
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AA seq
440 aa
AA seq
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MNTQVWHGHAMKKAAVLIGCTALVLGLTGAATDAEAGSSRDLGRQVLGANDGWGSEGAGT
TGGSAADAEHVYTVTTWAEFKAALAAGGDAPKIIKVKGMLDAVSQGCEAFVTGGYDLQQY
LKDYDPAVYGNDKVAMGPQEDARVASMANQNAAIKVFIPSNTTIVGVGKNSGILGGSIQV
LGVSNVIIRNLTIEAPLDCFPKWDPTDDNNTGNWNSEYDTVVVYGTDHVWLDHNTFTDGR
YPDSERPVYFGKVFQQHDGLTDIVRGSNYVTVSWNRYENHDKNMLIGNGDGLAAIDAGKL
KVTMHHNRFDGILQRSPRVRFGQVDVYNNHYVVTEEQKDDYYIFGVGISSQLYATDNSIS
LPPGASVGKALKKWSEAPLTAENNYVNGKRTDLIAVHNAEIPSETLQSGAGWKPTLRTKV
DHPKAVPGIVGYNAGAGRLR
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgaacacacaggtatggcatgggcatgccatgaagaaggctgccgtgctgatcggctgc
accgcgctcgtcctcggtctcaccggcgccgccaccgacgccgaggcgggttcctcccgt
gacctcggccgccaggtcctcggcgcgaacgacggctggggctccgagggggccggcacg
accggcggttcggccgccgacgccgagcacgtctacacggtcaccacctgggcggagttc
aaggccgcgctggccgccggcggcgacgcgccgaagatcatcaaggtcaagggcatgctc
gacgccgtctcccagggctgcgaggccttcgtcaccggcggctacgacctccagcagtac
ctgaaggactacgacccggccgtctacggcaacgacaaggtcgccatgggcccgcaggag
gacgcccgggtcgcctccatggcgaaccagaacgcggcgatcaaggtgttcatccccagc
aacaccaccatcgtcggtgtcggcaagaactccggcatcctcggcggcagcatccaggtc
ctgggcgtctcgaacgtgatcatccgcaacctcaccatcgaggccccgctcgactgcttc
cccaagtgggacccgaccgacgacaacaacaccggcaactggaactccgagtacgacacc
gtggtcgtctacggcacggaccacgtgtggctggaccacaacacgttcaccgacgggcgc
taccccgacagcgagcggccggtctacttcggcaaggtcttccagcagcacgacgggctg
acggacatcgtgcgcggctccaactacgtgacggtgtcctggaaccgctacgagaaccac
gacaagaacatgctgatcggcaacggcgacggcctcgccgccatcgacgccggcaagctc
aaggtcaccatgcaccacaaccgcttcgacgggatcctccagcgttccccgcgcgtgcgg
ttcgggcaggtcgacgtctacaacaaccactacgtggtgaccgaggaacagaaggacgac
tactacatcttcggcgtcggcatctcctcgcagctgtacgccaccgacaactcgatctcg
ctgccgcccggcgcgagcgtcggcaaggccctgaagaagtggagcgaggccccgctgacc
gccgagaacaactacgtcaacggcaagcggaccgacctgatcgccgtccacaacgcggag
atcccctcggagaccctccagtcgggcgccggatggaagccgaccctgcggaccaaggtc
gaccaccccaaggcggtcccggggatcgtcgggtacaacgcgggcgccggccgcctgcgc
tga
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