Sulfidibacter corallicola: J3U87_14925
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Entry
J3U87_14925 CDS
T07864
Symbol
rtcR
Name
(GenBank) RNA repair transcriptional activator RtcR
KO
K14414
transcriptional regulatory protein RtcR
Organism
scor
Sulfidibacter corallicola
Brite
KEGG Orthology (KO) [BR:
scor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scor03000
]
J3U87_14925 (rtcR)
Transcription factors [BR:
scor03000
]
Prokaryotic type
Other transcription factors
Others
J3U87_14925 (rtcR)
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GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
Mg_chelatase
AAA_5
AAA
AAA_16
MCM
AAA_22
NACHT
AAA_14
AAA_19
AAA_2
RsgA_GTPase
AAA_7
AAA_30
AAA_33
ABC_tran
IstB_IS21
TsaE
ATPase_2
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QTD54401
UniProt:
A0A8A4TYR3
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Position
complement(4988887..4990491)
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AA seq
534 aa
AA seq
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MKKVVIGLYGTTLDGGLGKKRWQRWRPTLSICQHEDFLIDRFDLLVPDEFTKAADILIED
MKTVAPETEIQVKPMNFTDPWDFEEVFSTLLRFAQEYPFNEDREEYLLHITTGTHVAQIC
LFLLTEARYFPANLIQTSPPRGKKAKGAGSYKIIDLDLSKYDLIASRFAKEQEEGTAFLK
SGIDTANARFNAMIDQIEKVAIRSKSPILLMGATGAGKSHLAKRIFELKKLRRQVTGRFV
EVNCATLRGDAAMSTLFGHVRGAFTGAIGDRPGLLRAAHQGVLFLDEVGELGSDEQAMLL
RALEEKSFMPVGSDREVHSDFQLIAGTNRDLWEKVHEGKFREDLLARMNLWTYKLPSLRE
RPEDIEPNLLYELEKFARTHGRTTTFNKEAYTRFLNFATGPDGQWNANFRDLNASVTRMA
TLSGGSRINEPIVAEEVERLRAQWERPRLENKVLARYFTKDELEEIDQFDQAQLAKVLEV
CEQSRSLAEAGRVLFAASRARKTSSNDSDRLRKYLMKFNLQASDIVGRKYFRPQ
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaaagtggtgatcggtttgtatggaacgacgctcgacggtggacttggcaagaag
cgctggcaacgttggcgtcccacgctttcgatctgtcagcacgaggattttctcatcgat
cgcttcgacctgctggtcccagacgagttcaccaaggccgcagacattttgatcgaagac
atgaaaacggtcgctcccgaaacggaaatccaggtgaagccgatgaatttcacggatccc
tgggatttcgaggaggtgttctccaccctgttgcgattcgcccaggagtaccccttcaac
gaagatcgggaagaatacctgctccacatcacgaccggcacccacgtcgcccagatctgc
ctgttcctgctgaccgaggcacgctacttccccgcaaacttgattcaaacctcgccgcca
cgcgggaaaaaggccaagggggccggctcctacaaaatcatcgacctggatctttccaaa
tacgacttgatcgcttcgcgtttcgccaaggaacaggaggagggcacggcgttcctgaag
tcgggcatcgatacggccaatgcccggttcaacgccatgatcgaccaaatcgaaaaggtg
gcgatccgctcgaagtccccgattcttttgatgggcgcaaccggcgccggcaaatcccac
ctggccaaacggatcttcgaactcaagaagttgcgccgccaagtcaccggtcgcttcgtg
gaagtcaactgcgccaccctgcgcggcgacgccgccatgtccaccctgttcggccacgtg
cgcggcgccttcaccggcgccatcggcgatcggcccggccttctgcgtgccgcccatcaa
ggggtcctgttcttggacgaagtaggcgaactgggcagcgacgagcaggcgatgttgctg
cgcgctctggaggagaagagtttcatgccggtcggctcggatcgggaagtccacagtgac
ttccaattgatcgccggaacgaaccgcgacctttgggaaaaggtccacgaaggaaaattc
cgcgaagatctcctggcacgtatgaacctgtggacttacaagttaccttccctgcgcgag
cggcccgaagacatcgagcccaacttgctttacgagttggagaaattcgcgcgcacccat
ggccgcacgacgaccttcaacaaggaagcctacacgcgcttcctcaacttcgccacggga
ccggacggtcaatggaacgccaatttccgggacctgaacgcctcggtgacgcggatggcc
acgctttccggtggaagccgcatcaacgagcccatcgtggccgaggaagtggagcggttg
cgggcccagtgggagcggccccgtttggaaaacaaggtcctggcgcgctatttcacgaaa
gatgaattggaagagatcgatcaattcgatcaagcccagttggcgaaagtgttggaagtg
tgcgagcagtcgcgctcgttggccgaagcggggcgcgtgctttttgcggccagtcgcgcg
cgtaagacgagttccaacgatagcgaccgattgcgcaagtacttgatgaaattcaacctt
caggcttcggacatcgtgggtcgaaagtacttccgacctcaatag
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