Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488: SCAT_5655
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Entry
SCAT_5655 CDS
T01646
Name
(GenBank) protein of unknown function
KO
K06236
collagen type I alpha
Organism
sct
Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488
Pathway
sct04518
Integrin signaling
sct04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sct00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04518 Integrin signaling
SCAT_5655
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
SCAT_5655
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sct00536
]
SCAT_5655
Glycosaminoglycan binding proteins [BR:
sct00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
SCAT_5655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC3
Motif
Other DBs
NCBI-ProteinID:
CCB78343
LinkDB
All DBs
Position
complement(6073584..6076469)
Genome browser
AA seq
961 aa
AA seq
DB search
MVGQAAFADAGGGEEEVEAVDGAGYLDEFGGDTGGGQACGVVAALVAQRVDLRHGDVGGR
QCAQVGGADRGGVGVGVGVLGVVLPGQFHRAPVEDGGVGELAHRGGGQAAVHARVGQQLE
EDVRACLVAGAQHGGGGDIAAGAAAGHGDACPVAAEFGRVGGDPEQGGVGVVGRGGVGVF
GGEAVVDGDDDGPGVAGVAQGASLLGLGRSVGEGAAVDVEDHRQGFGGVGPVDAQPQVSG
GAGDVQVPHRDLVVGGGVGAGAQECVALGVGKDRVEAVDGEDAGVGGLQQGLDLGVDCGD
GHGWMATFRVRTGSCPVLVCGTDLSLCRSPAAQKWPWGHHLQLLGHDRCDTSSCGRSRPR
AGGGLRPQHPGPDADRGRDPGGTGGLRGAHPVPGRLAGADGERVRRHAPGRPVPAGARRH
RDRRGDPLPGRGGEGSGGRRCRGGVACGPAARPAGVLVHRLVRPRGGRSAGRRPGRDPLA
LCPAVQTALPHGRPRHQPVVRRRSRDPDLGGRCGGHRSVPAPGPGGSWQFRGEPRGPVQR
RRADAGRRPGSVHRAPGPGGRGDLDGRGASTDDGAPGPAALPQGPRGAVPHERADLHQAV
PAGDRALPRRLAHLRPPEARTPPAGIDRTARGRHRRQGRPGQRDEPTATHARHPGHHPLR
LPQGVPVLPHRAYAVGPGPYEPGCAACDSAWARRLDESGRWPVAKLAQQPPAGRNRRRPP
GSIGDAPTSAPTTALRTVAGIGQPLRRPRHRLANRLVKPTPRFPGRALVSSPEGATVAVG
TTPDGGGWARCDADSGARLPGVFPHRVQERRTHGPPVVPQRTPDDGTRHPWRHIHATVST
PPVPQARSGSPSPASKPPRAPAPSALLRLRDGVGHGMAPGPAPSTAWRAAADKGVDGADV
APSATRNARPPREARGSGAQSGDKERTKKGDGVGGRRRGGSGAGRVGGWGVRGGETGRSG
G
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
ttggtcggccaggctgcgttcgctgatgcgggcggaggggaagaggaggtcgaagccgtg
gacggcgccgggtacttggacgagttcggtggtgacaccggcggcggacaggcgtgcggc
gtagtcgcggccctcgtcgcgcagcgggtcgatctccgccacggcgatgtaggtgggcgg
cagtgcgcccaggtcggtggtgcggatcggggaggcgtaggggtcggggtgggtgtcctt
ggcgtagtactgccaggccagttccatcgcgccccggttgaggacgggggtgtcggtgaa
ctcgcgcaccgaggcggaggtcaggctgccgtccacgcccgggtaggtcagcagctggaa
gaggatgtgcgggcctgcctggtcgcgggcgcgcagcacggtggaggcggcgatattgcc
gccggcgctgccgccggccacggcgatgcgtgcccggtcgccgccgagttcggccgggtt
ggcggcgatccagagcagggcggcgtaggcgtcgtcggccgcggcggggtaggggtgttc
gggggcgaggcggtagtcgacggagacgacgacggcccgggcgtcgcgggcgtagcgcag
ggagcgtccctcctcggcctcgggagatccgtaggtgaaggcgccgccgtggatgtagag
gatcatcggcagggcttcggtggtgtcgggccggtagacgcgcagccgcaggtctccggc
ggggccggggatgtgcaggtcccgcaccgtgacctggtcgtcggcgggggtgtcggggcg
ggcgcgcaggagtgcgtagcgctgggggtcggcaaggaccgcgtcgaggccgtagacggg
gaagatgccggtgtcggcggtctccagcagggtctggatctcggggtcgactgcggggac
gggcatggctggatggccaccttccgggtgcggaccgggtcgtgcccggtgctggtgtgc
ggaactgacctcagtctctgccgatctccagcggcgcagaagtggccatggggccaccat
ctgcaactattgggccatgaccgttgcgacacctcatcatgtggccgttctcgccctcgc
gccggtggtggccttcgacctcagcatcccggcccagatgctgaccggggtcgagacccg
ggcgggacaggcggcctacgaggtgcgcaccctgtccccggacggctcgccggtgccgac
ggtgaacgggtacggcgtcacgccccagggcgacctgtccctgctggagcacgccgacac
cgtgatcgtcgcggggacccgctgcccggacgtggtggagaagggagcggtggacgccgg
tgtcgcggaggcgttgcgtgcggcccggcagcgcgcccggctggtgtccttgtgcaccgg
ctcgttcgtcctcgcggcggccggtctgctggacggcggccgggccgcgacccactggcg
ttatgcccagcagttcagacggctcttccccacggtcgacctcgacaccaacccgttgta
cgtcgccgatcgcgggatcctgacctcggcgggcggtgcggcggccatcgatctgtgcct
gcacctggtccgggaggatcatggcagttccgtggcgaaccgcgtggcccggtacaacgt
cgtcgcgccgatgcgggacggcggccaggctcagtacatcgagcacccggtccgggagga
cgcggggacctcgacggccggggcgcgagcactgatgacggagcacctggaccggcggct
ctccctcaaggacctcgcggcgcagtgccacatgagcgtgcggaccttcaccaggcggtt
ccggcaggagaccgggctctcccccgccgcctggctcacctccgcccgcctgaagcacgc
acgccacctgctggaatcgaccgaactgcccgtggacgacatcgccgccagggccggcct
gggcagcgggacgaacctacggcaacacatgcgcgacaccctggacaccaccccctccgc
ctaccgcagggcgttccggtcctcccccaccgcgcatacgcggtaggtccggggccgtac
gagccgggctgcgcggcatgcgacagcgcgtgggcgaggcgtctcgacgagtccggacgg
tggcccgtcgcaaaactcgcacagcagccgccggcgggccgcaaccgtcgacgtccgccc
ggaagcatcggagacgcgccaacctctgctccaacgacggcacttcgcacagttgcggga
attggtcagccactgcgtcgcccacggcaccggctcgccaaccggctggtcaagcccacg
ccccggttcccggggcgggcgctggtgtcctccccggagggcgcgaccgtcgcggtcggg
accacccccgacggagggggctgggcgagatgcgacgccgactccggggcccggctgccc
ggcgtcttcccgcaccgcgtccaagagcgccgcacccacggccccccggtggtcccgcag
cggacacccgacgacggcacccgccatccctggcgccacatccacgcgacggtgtcaact
ccgcctgtcccgcaggccagatcgggaagtccgtcgcccgcgtccaagccgccgcgggcc
ccggcgccatcggcgctcctccgcctccgggacggcgtcggtcacggcatggccccgggg
ccggctccgtccacagcctggcgggccgcagcggacaaaggcgtcgacggggcggacgtc
gctccgtcggcgacccgcaacgcaaggccgccccgcgaggctcgcggaagcggcgcccaa
agcggtgacaaagagaggacaaagaaaggggatggggtcgggggaaggcggaggggtggt
tccggcgcgggccgggtaggcgggtggggtgtccggggtggtgaaaccggccggtcgggc
gggtag
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