Sorangium cellulosum So0157-2: SCE1572_21240
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Entry
SCE1572_21240 CDS
T02718
Name
(GenBank) hypothetical protein
KO
K05522
endonuclease VIII [EC:3.2.2.-
4.2.99.18
]
Organism
scu
Sorangium cellulosum So0157-2
Pathway
scu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
scu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SCE1572_21240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scu03400
]
SCE1572_21240
Enzymes [BR:
scu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SCE1572_21240
DNA repair and recombination proteins [BR:
scu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SCE1572_21240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
DZR
zinc_ribbon_9
Motif
Other DBs
NCBI-ProteinID:
AGP36796
UniProt:
S4XWP8
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All DBs
Position
5993827..5994870
Genome browser
AA seq
347 aa
AA seq
DB search
MPAERRAPFALEPLAIRSVCTQSVLEPLMPEGDTLFRIAAALGPALEGARVIALELPRSD
RRCDALVGRRIERVEARGKNLLIFFDDGTVLHTHLRMSGAWHLYREGERWKRSEATASAI
LAVPGYVAVCFRAPIVRLLRASALRGDRLLGGLGPDLLGDGFDAAEALRRLRALDEVPLG
VAIMDQRVVAGIGNVYKSELLFRRRLDPFAPVRAYSDEELSAMLDLGRRLLQANVEPRDP
SGAYRGPTAHYLHTRTTRAGFDRGRRPVSVYGREGRACYDCGAAVQMRRQGTMMRSTYFC
PRCQPARAAPAPAAGTATPAGAAQPDGSAPSSDGSAPPSDGSTRSVA
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
gtgccggcggagcgtcgtgcgcccttcgcgctggagccccttgcgatccggtcggtctgc
acccagagcgtcctggagccgctcatgcccgaaggcgacacgctcttccggatcgccgct
gccctcggccccgcgctggagggcgcgcgcgtcatcgccctggagctgccccggagcgac
cggcggtgcgacgcgctcgtgggccggcggatcgagcgcgtggaggcgcggggcaagaac
ctgttgatcttcttcgacgacggcaccgtgctgcacacgcacctgcggatgagcggcgcg
tggcacctctaccgcgagggcgagcgctggaagcggtccgaggcgacggcgtcggcgatc
ctcgcggtcccgggctacgtcgccgtctgtttccgcgcgcccatcgtgcgcctgctccgc
gcgagcgccttgcgcggcgaccggctgctcggcggcctcggcccggacctgctcggcgac
ggcttcgacgccgcggaggcgctccgccgcctgcgcgcgctcgacgaggtgccgctcggg
gtcgcgatcatggatcagcgcgtcgtcgccggcatcggcaatgtctacaagagcgagctc
ctcttccggaggcggctcgatccgttcgccccggtccgggcgtactcggacgaggagctc
tccgcgatgctcgacctcggccgccgtctcctgcaggccaacgtcgagccgcgggatccc
tccggcgcgtaccgcggtcccaccgcgcactacctccacacgcgcacgacgcgcgccggg
ttcgaccgcggcaggcggccggtcagcgtctacggccgcgaggggcgcgcgtgttacgac
tgcggcgccgcggtccagatgcgccggcaggggacgatgatgcggtcgacgtacttctgc
ccccgctgccagccggcccgcgctgcgccggcgccggcggccgggacagcgacgccggcg
ggggcagcgcagccggacggatctgcgccgtcctcggacgggtccgcgccgccatcggac
ggatctacgcgatcggtagcgtga
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