KEGG   Sorangium cellulosum So0157-2: SCE1572_27170
Entry
SCE1572_27170     CDS       T02718                                 
Name
(GenBank) RNA polymerase sigma70 factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
scu  Sorangium cellulosum So0157-2
Pathway
scu02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:scu00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    SCE1572_27170
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:scu03021]
    SCE1572_27170
Transcription machinery [BR:scu03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     SCE1572_27170
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_1 Sigma70_r1_2 Sigma70_ner VPS28
Other DBs
NCBI-ProteinID: AGP37835
UniProt: S4Y0Y5
LinkDB
Position
7771909..7773828
AA seq 639 aa
MASKAKQSSGRAGGVARAAGGGALNGARHASTRGHAEGGARPSNKGDAGIRAERSEKDRK
TLEKLVETGKSKGFLTYDEVNDALPADVAPDQLDDVVGALGDEDIEIVDGATQVKIAPKR
IADEEAGEKKLVVTPDREEEDVDYYSKSNDPVRMYLRKMGSVSLLTREGEVEIAKRIEIG
EQKVNAAILDSPIAVREIIDLGEKLRKHKIRVKELIKDAENDDQEFDEEEADRRIIRLID
KVKRVDKKKAELLEERKDVKTEVRRKQIDVEVTQATAELVTTLEEMRLNKRTIDKIVQKL
KSLISKVEKAEAGATELERRTGLSKGELKRELIKVKGNRALEGRLAKKLNVNREELNDFE
STIKNAQKGLKKVEEELNIDVAAIRETYENIREGERMAERAKAELVEANLRLVVSIAKKY
TNRGLQFLDLIQEGNIGLMKAVDKFEYKRGYKFSTYATWWIRQAITRAIADQARTIRIPV
HMIETINKLIRTSRYLVQEYGREPTPEEIAEKMELPLDKVRKVLKIAKEPISLETPIGEE
EDSHLGDFIEDKSVISPAEAVINMNLAEQTRKVLKTLTPREEKVLRMRFGIGEKSDHTLE
EVGQDFEVTRERIRQIEAKALRKLRHPSRSKQLKSFIDS
NT seq 1920 nt   +upstreamnt  +downstreamnt
atggcgagcaaggccaagcaatcttccggtcgggcaggcggggtcgcgagggcggcgggg
ggcggcgcgctcaacggcgcgcggcacgcttcgacacgcgggcacgccgagggaggggca
cgccctagcaacaaaggagacgcgggcatccgagccgagcggtccgagaaggaccggaag
accctggagaagctcgtcgagaccggcaagagcaaaggctttctcacctacgacgaggtg
aacgacgcgctccccgcggacgtcgcgcccgatcagctcgacgacgtggtgggcgccctc
ggcgacgaggacatcgagatcgtcgacggcgcgacccaggtgaagatcgcgccgaagcgc
atcgccgacgaggaggcgggcgagaagaagctcgtcgtcacgcccgaccgcgaggaagag
gacgtcgactactactcgaagtcgaacgatcccgtccggatgtacctccgcaagatgggc
agcgtctcgctgctcacccgcgagggcgaggtcgagatcgcgaagcggatcgagatcggc
gagcagaaggtcaacgccgcgatcctcgactcccccatcgccgtccgcgagatcatcgat
ctcggcgagaagctccggaagcacaagatccgggtgaaggagctcatcaaggacgccgag
aacgacgaccaggagttcgacgaggaggaggccgaccggcgcatcatccgcctcatcgac
aaggtgaagcgcgtcgacaagaagaaggcggagctcctcgaggagcgcaaagacgtcaag
accgaggtccgccgcaagcagatcgacgtcgaggtgacgcaggcgacggccgagctcgtg
acgacgctcgaggagatgcgcctcaacaagcggacgatcgacaagatcgtccagaagctg
aagagcctcatctcgaaggtcgagaaggcggaggccggcgcgaccgagctggagcgccgc
acggggctctcgaagggcgagctcaagcgcgagctcatcaaggtgaagggcaaccgcgcc
ctcgagggccgcctcgccaagaagctcaacgtcaaccgcgaggagctcaacgacttcgag
tcgaccatcaagaacgcccagaagggcctgaagaaggtcgaggaggagctcaacatcgac
gtcgcggcgatccgcgagacctacgagaacatccgcgaaggcgagcggatggcggagcgc
gcgaaggcggagctggtcgaggcgaacctccgcctcgtcgtctccatcgcgaaaaagtac
acgaaccgcggcctccagttcctggacctcatccaggagggcaacatcggcctcatgaag
gccgtcgacaagttcgagtacaagcgcggctacaagttctcgacctacgcaacgtggtgg
atccggcaggcgatcacccgcgcgatcgcggaccaggcgcggacgatccgcatcccggtc
cacatgatcgagacgatcaacaagctcatccgcacctcgcgctacctcgtgcaggagtac
ggccgcgagccgacccccgaggagatcgccgagaagatggagctcccgctcgacaaggtg
cggaaggtcctgaagatcgcgaaggagccgatctcgctcgagaccccgatcggcgaggag
gaggactcgcacctcggcgacttcatcgaggacaagagcgtgatctcgccggcagaggcg
gtgatcaacatgaacctcgccgagcagacccgtaaggtcctgaagacgctgacgccgcgc
gaggagaaggtgctccggatgcgcttcggcatcggcgagaagagcgatcacaccctcgag
gaggtcggtcaggacttcgaggtcacccgcgagcgcatccgtcagatcgaggccaaggcg
ctccgcaagctccggcaccccagccggtcgaagcagctgaagagcttcatcgacagctag

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