Sorangium cellulosum So0157-2: SCE1572_27170
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Entry
SCE1572_27170 CDS
T02718
Name
(GenBank) RNA polymerase sigma70 factor
KO
K03086
RNA polymerase primary sigma factor
Organism
scu
Sorangium cellulosum So0157-2
Pathway
scu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
scu00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SCE1572_27170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scu03021
]
SCE1572_27170
Transcription machinery [BR:
scu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SCE1572_27170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
Sigma70_ner
VPS28
Motif
Other DBs
NCBI-ProteinID:
AGP37835
UniProt:
S4Y0Y5
LinkDB
All DBs
Position
7771909..7773828
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AA seq
639 aa
AA seq
DB search
MASKAKQSSGRAGGVARAAGGGALNGARHASTRGHAEGGARPSNKGDAGIRAERSEKDRK
TLEKLVETGKSKGFLTYDEVNDALPADVAPDQLDDVVGALGDEDIEIVDGATQVKIAPKR
IADEEAGEKKLVVTPDREEEDVDYYSKSNDPVRMYLRKMGSVSLLTREGEVEIAKRIEIG
EQKVNAAILDSPIAVREIIDLGEKLRKHKIRVKELIKDAENDDQEFDEEEADRRIIRLID
KVKRVDKKKAELLEERKDVKTEVRRKQIDVEVTQATAELVTTLEEMRLNKRTIDKIVQKL
KSLISKVEKAEAGATELERRTGLSKGELKRELIKVKGNRALEGRLAKKLNVNREELNDFE
STIKNAQKGLKKVEEELNIDVAAIRETYENIREGERMAERAKAELVEANLRLVVSIAKKY
TNRGLQFLDLIQEGNIGLMKAVDKFEYKRGYKFSTYATWWIRQAITRAIADQARTIRIPV
HMIETINKLIRTSRYLVQEYGREPTPEEIAEKMELPLDKVRKVLKIAKEPISLETPIGEE
EDSHLGDFIEDKSVISPAEAVINMNLAEQTRKVLKTLTPREEKVLRMRFGIGEKSDHTLE
EVGQDFEVTRERIRQIEAKALRKLRHPSRSKQLKSFIDS
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcaaggccaagcaatcttccggtcgggcaggcggggtcgcgagggcggcgggg
ggcggcgcgctcaacggcgcgcggcacgcttcgacacgcgggcacgccgagggaggggca
cgccctagcaacaaaggagacgcgggcatccgagccgagcggtccgagaaggaccggaag
accctggagaagctcgtcgagaccggcaagagcaaaggctttctcacctacgacgaggtg
aacgacgcgctccccgcggacgtcgcgcccgatcagctcgacgacgtggtgggcgccctc
ggcgacgaggacatcgagatcgtcgacggcgcgacccaggtgaagatcgcgccgaagcgc
atcgccgacgaggaggcgggcgagaagaagctcgtcgtcacgcccgaccgcgaggaagag
gacgtcgactactactcgaagtcgaacgatcccgtccggatgtacctccgcaagatgggc
agcgtctcgctgctcacccgcgagggcgaggtcgagatcgcgaagcggatcgagatcggc
gagcagaaggtcaacgccgcgatcctcgactcccccatcgccgtccgcgagatcatcgat
ctcggcgagaagctccggaagcacaagatccgggtgaaggagctcatcaaggacgccgag
aacgacgaccaggagttcgacgaggaggaggccgaccggcgcatcatccgcctcatcgac
aaggtgaagcgcgtcgacaagaagaaggcggagctcctcgaggagcgcaaagacgtcaag
accgaggtccgccgcaagcagatcgacgtcgaggtgacgcaggcgacggccgagctcgtg
acgacgctcgaggagatgcgcctcaacaagcggacgatcgacaagatcgtccagaagctg
aagagcctcatctcgaaggtcgagaaggcggaggccggcgcgaccgagctggagcgccgc
acggggctctcgaagggcgagctcaagcgcgagctcatcaaggtgaagggcaaccgcgcc
ctcgagggccgcctcgccaagaagctcaacgtcaaccgcgaggagctcaacgacttcgag
tcgaccatcaagaacgcccagaagggcctgaagaaggtcgaggaggagctcaacatcgac
gtcgcggcgatccgcgagacctacgagaacatccgcgaaggcgagcggatggcggagcgc
gcgaaggcggagctggtcgaggcgaacctccgcctcgtcgtctccatcgcgaaaaagtac
acgaaccgcggcctccagttcctggacctcatccaggagggcaacatcggcctcatgaag
gccgtcgacaagttcgagtacaagcgcggctacaagttctcgacctacgcaacgtggtgg
atccggcaggcgatcacccgcgcgatcgcggaccaggcgcggacgatccgcatcccggtc
cacatgatcgagacgatcaacaagctcatccgcacctcgcgctacctcgtgcaggagtac
ggccgcgagccgacccccgaggagatcgccgagaagatggagctcccgctcgacaaggtg
cggaaggtcctgaagatcgcgaaggagccgatctcgctcgagaccccgatcggcgaggag
gaggactcgcacctcggcgacttcatcgaggacaagagcgtgatctcgccggcagaggcg
gtgatcaacatgaacctcgccgagcagacccgtaaggtcctgaagacgctgacgccgcgc
gaggagaaggtgctccggatgcgcttcggcatcggcgagaagagcgatcacaccctcgag
gaggtcggtcaggacttcgaggtcacccgcgagcgcatccgtcagatcgaggccaaggcg
ctccgcaagctccggcaccccagccggtcgaagcagctgaagagcttcatcgacagctag
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