Streptomyces sp. CdTB01: AS200_10695 Help Entry AS200_10695       CDS       T04240                                  Name (GenBank) ATP-dependent DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism scx  Streptomyces sp. CdTB01 Pathway scx03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:scx00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     AS200_10695  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:scx03400]     AS200_10695 Enzymes [BR:scx01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      AS200_10695 DNA repair and recombination proteins [BR:scx03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      AS200_10695 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_Prim-Pol DNA_primase_S Motif Other DBs NCBI-ProteinID:  ALV38488 UniProt:  A0A0U3P0H3 LinkDB All DBs Position complement(2422089..2422994) Genome browser AA seq 301 aa AA seqDB search MRAGRRTVRVHRADKVLFTGGGDAKEYTKGDLVDYYRSAAPLMLPHLRGRPLMLERHPDG IDGPRFMQKNTPENYPDWITRVELAKEGGTVCHTVCDDTATLVYLADQAAVTLHRWLSRV GRVDRPDRLVFDLDPAGDDFAAVREAARWLGELLDELKLPSALMTTGSRGLHVVVPVDGR HDFDEVRAFARDVADTLAEAHPDRLTTAARKKDRGERLYLDVGRNAYAQTAVAPLTVRAL PGAPVATPMDWSQLDDPGLNARRWTIADAVEQVRGDPWAGLLSKARALGPARRRLDALRG A NT seq 906 nt NT seq  +upstreamnt  +downstreamnt gtgcgggccgggcgccggacggtgcgggtccaccgggcggacaaggtgctcttcaccgga ggcggcgacgcgaaggagtacaccaagggcgacctggtcgactactaccggtcggccgcc ccgctgatgctgccgcacctgcgcgggcgtccgctgatgctggaacggcatccggacggc atcgacggcccgcgtttcatgcagaagaacaccccggagaactacccggactggatcacc cgcgtcgagctggccaaggagggcggcacggtctgccacaccgtgtgcgacgacacggcc accctggtgtacctggccgaccaggccgccgtcacgctgcaccgctggctgtcccgggtg gggcgggtggaccggcccgaccggttggtgttcgacctggacccggcgggtgacgacttc gcggcggtgcgggaggcggcccggtggctgggcgagctcctcgacgagctgaagctgccc agcgccctgatgacgacgggctcgcgcggcctgcacgtggtggtgccggtcgacggccgg cacgacttcgacgaggtccgcgcgttcgcccgggacgtcgccgacaccctcgccgaggcc caccccgaccggctcaccaccgccgcccgcaagaaggaccgcggcgagcggctctacctc gacgtgggccgcaacgcctacgcgcagaccgcggtcgcccccctcaccgtgcgtgccctg cccggggcgcccgtggccacccccatggactggtcccagctggacgacccgggcctgaac gcgcgtcgctggaccatcgccgacgcggtcgaacaggtccgcggcgacccctgggcgggc ctgctgagcaaggcgcgcgcgctcggacccgcccgccgcaggctcgacgcgttgcgcgga gcgtga

DBGET integrated database retrieval system