Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488: SCATT_35560
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Entry
SCATT_35560 CDS
T02095
Name
(GenBank) Nos5
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
scy
Streptantibioticus cattleyicolor NRRL 8057 = DSM 46488
Pathway
scy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
scy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SCATT_35560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scy03021
]
SCATT_35560
03400 DNA repair and recombination proteins [BR:
scy03400
]
SCATT_35560
Enzymes [BR:
scy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SCATT_35560
Transcription machinery [BR:
scy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SCATT_35560
DNA repair and recombination proteins [BR:
scy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SCATT_35560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
AEW95927
UniProt:
F8JYD2
LinkDB
All DBs
Position
3779359..3782844
Genome browser
AA seq
1161 aa
AA seq
DB search
MAASRNASTANTNNGASTAPLRISFAKIKEPLEVPNLLALQTESFDWLLGNAAWKARVEA
ALESGQDVPTKSGLEEIFEEISPIEDFSGSMSLTFRDHRFEPPKNSIDECKERDFTYAAP
LFVTAEFTNNETGEIKSQTVFMGDFPLMTNKGTFVINGTERVVVSQLVRSPGVYFDSTID
KTSDKDIFSAKIIPSRGAWLEMEIDKRDMVGVRIDRKRKQSVTVLLKALGWTNDQILEEF
GEYESMRATLEKDHTQGQDDALLDIYRKLRPGEPPTREAAQTLLENLYFNPKRYDLAKVG
RYKVNKKLGSDAPLDAGVLTVEDVIATIKYLVKLHAGETETVGDNGRPLMVETDDIDHFG
NRRIRSVGELIQNQVRTGLARMERVVRERMTTQDVEAITPQTLINIRPVVASIKEFFGTS
QLSQFMDQTNPLSGLTHKRRLNALGPGGLSRERAGLDVRDVHPSHYGRMCPIETPEGPNI
GLIGSLASYGRINAFGFIETPYRRVVEGRVTEDVHYLTADEEDRFLIAQANAPLTEEGTF
AEARVLVRRRGGEVDLVPSQDVDYMDVSPRQMVSVATAMIPFLEHDDANRALMGSNMMRQ
AVPLLKAESPLVGTGIEYRAAVDAGDVITAEKDGVVQEVSADYVTVANDDGTYTTYRVAK
FNRSNQGTSFNQKVVVDEGARVVAGQVLADGPSTERGEMALGKNLLVAFMPWEGHNYEDA
IILSQRLVQDDVLSSIHIEEHEVDARDTKLGPEEITRDIPNVSEEVLADLDERGIIRIGA
EVVAGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGETGKVIGVRVFD
REEGDELPPGVNQLVRVYVAQKRKITDGDKLAGRHGNKGVISKILPVEDMPFLEDGTPVD
IILNPLGVPSRMNPGQVLEIHLGWLAKQGWDVSGIADEWARRLEGIGAGQVEPGTNVATP
VFDGAREDEIAGLFESTIPNRDGDRMVLPSGKARLFDGRSGEPFPEPISVGYMYILKLHH
LVDDKLHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKSDD
VLGRVKVYEAIVKGENIPEPGIPESFKVLIKEMQSLCLNVEVLSSDGMSIEMRDTDEDVF
RAAEELGIDLSRREPSSVEEV
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
ttggccgcctcgcgcaacgcctcgactgccaatacgaacaacggcgcaagcaccgccccg
ctgcgcatctcctttgcgaagatcaaggagccgcttgaggttccgaaccttctcgcgctg
caaaccgagagcttcgattggctgctcggcaacgccgcttggaaggctcgtgtcgaggcg
gcgctggaaagcgggcaggatgtgcccacgaagtccggtctggaggagatcttcgaggag
atctccccgatcgaggacttctccgggtcgatgtcgctgaccttccgcgaccaccgcttc
gagcccccgaagaactcgatcgacgagtgcaaggagcgcgacttcacgtacgccgccccg
ctcttcgtcaccgccgagttcaccaacaacgagaccggcgagatcaagtcccagacggtc
ttcatgggcgacttcccgctcatgaccaacaagggcaccttcgtcatcaacggcaccgag
cgtgtcgtggtctcgcagctcgtgcggtcgccgggtgtctacttcgacagcaccatcgac
aagacctccgacaaggacatcttctccgccaagatcatcccgtcccggggtgcctggctg
gagatggagatcgacaagcgcgacatggtcggtgtgcgcatcgaccgcaagcgcaagcag
tccgtcaccgtgctcctgaaggctctgggctggaccaacgaccagatcctggaggagttc
ggcgagtacgagtcgatgcgcgccaccctggagaaggaccacacccagggccaggacgac
gcgctgctcgacatctaccgcaagctgcgcccgggcgagccgccgacgcgtgaggccgcg
cagacgctgctggagaacctgtacttcaacccgaagcgctacgacctcgccaaggtcggc
cgctacaaggtcaacaagaagctcggcagcgacgcgccgctggacgccggcgtgctcacc
gtcgaggacgtcatcgccaccatcaagtacctggtcaagctgcacgccggcgagaccgag
acggtcggcgacaacggccgcccgctgatggtcgagaccgatgacatcgaccacttcggc
aaccgccgcatccgcagcgtcggcgagctgatccagaaccaggtccgtacgggtctcgcc
cgtatggagcgcgtcgtgcgcgagcgcatgaccacccaggacgtcgaggcgatcacgccg
cagaccctgatcaacatccggccggtcgtcgcctccatcaaggagttcttcggcaccagc
cagctgtcccagttcatggaccagaccaacccgctgtcgggtctgacccacaagcgccgg
ctcaacgcgctgggcccgggtggtctctcccgtgagcgggccggtctggacgtgcgtgac
gtgcacccgtcgcactacggccgcatgtgcccgatcgagacgccggaaggcccgaacatc
ggtctgatcggctcgctcgcctcgtacggccggatcaacgcgttcggcttcatcgagacc
ccgtaccgccgggtcgtcgagggccgggtcaccgaggacgtgcactacctgaccgcggac
gaggaggaccgcttcctcatcgcgcaggccaacgcgccgctcaccgaggagggcaccttc
gccgaggcccgtgtgctggtccgccgccgtggcggcgaggtcgacctcgtcccctcgcag
gacgtggactacatggacgtctcgccgcgccagatggtgtcggtggccaccgccatgatc
ccgttcctggagcacgacgacgccaaccgcgcgctcatgggctccaacatgatgcgccag
gcggtgccgctgctgaaggcggagtcgccgctggtcggcaccggcatcgagtaccgcgcc
gcggtcgacgccggtgacgtcatcaccgccgagaaggacggcgtggtccaggaggtctcc
gcggactacgtcacggtggccaacgacgacggcacctacaccacctaccgggtcgccaag
ttcaaccgctccaaccagggcacctccttcaaccagaaggtggtcgtggacgagggcgcc
cgggtcgtcgccggccaggtgctcgccgacggcccctccaccgagcggggcgagatggcc
ctcggcaagaacctgctggtcgcgttcatgccgtgggagggccacaactacgaggacgcg
atcatcctgtcgcagcgcctcgtccaggacgacgtcctctcctcgatccacatcgaggag
cacgaggtcgacgcccgggacaccaagctcggccccgaggagatcacccgggacatcccg
aacgtctccgaggaggtcctcgccgacctcgacgagcgcggcatcatccgcatcggtgcc
gaggtcgtggccggcgacatcctggtcggcaaggtcaccccgaagggtgagaccgagctg
accccggaggagcggctgctgcgcgcgatcttcggtgagaaggcccgtgaggtccgtgac
acctcgctgaaggtgccgcacggtgagaccggcaaggtcatcggcgtgcgcgtcttcgac
cgcgaggagggcgacgagctgccgccgggcgtcaaccagctggtccgcgtctacgtggcc
cagaagcgcaagatcaccgacggtgacaagctcgccggccgccacggcaacaagggcgtc
atctccaagatcctccccgtcgaggacatgccgttcctggaggacggcaccccggtcgac
atcatcctcaacccgctcggcgtcccctcccggatgaacccgggccaggtcctggagatc
cacctgggctggctcgccaagcagggctgggacgtctccggcatcgccgacgaatgggcc
cgccgtctggagggcatcggcgccggccaggtcgagccgggcaccaacgtcgccaccccg
gtgttcgacggcgcccgggaggacgagatcgccggcctgttcgagtcgacgatccccaac
cgcgacggcgatcgcatggtcctgccctcgggcaaggcccggctcttcgacggccgctcc
ggcgagccgttcccggagccgatctccgtcgggtacatgtacatcctgaagctgcaccac
ctggtggacgacaagctgcacgcccgctccaccggtccgtactcgatgatcacccagcag
ccgctgggtggtaaggcccagttcggtggtcagcgcttcggtgagatggaggtgtgggcg
ctggaggcgtacggcgccgcctacgccctccaggaactgctgacgatcaagtccgacgac
gtcctcggtcgcgtgaaggtctacgaggccatcgtcaagggcgagaacatccccgaaccg
ggcatcccggagtccttcaaggtgctcatcaaggagatgcagtcgctctgcctcaacgtg
gaggtgctctcctcggacggcatgtccatcgagatgcgcgacaccgacgaggatgtcttc
cgcgcggcggaggagctcggtatcgacctgtcccggcgcgagccgagcagcgtcgaagag
gtctga
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