Stenotrophomonas cyclobalanopsidis: AB1723_09120
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Entry
AB1723_09120 CDS
T10607
Name
(GenBank) farnesyl diphosphate synthase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
scyc Stenotrophomonas cyclobalanopsidis
Pathway
scyc00900
Terpenoid backbone biosynthesis
scyc01100
Metabolic pathways
scyc01110
Biosynthesis of secondary metabolites
Module
scyc_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
scyc00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
AB1723_09120
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
scyc01006
]
AB1723_09120
Enzymes [BR:
scyc01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
AB1723_09120
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
AB1723_09120
Prenyltransferases [BR:
scyc01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
AB1723_09120
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
XCZ89261
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All DBs
Position
1936706..1937584
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AA seq
292 aa
AA seq
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MTAEAQFARWRDRIESQLDAALPSPADAPQRLHQAMRYSVLGGGKRMRPLLVYASGQLFG
AMLDQLDAAAMAVEMIHAYSLVHDDLPAMDDDALRRGKPTTHIAFDEATAILAGDALQTR
AFGLLADAPLPASLRVACLQTLAHASGASGMCGGQALDIDATGQQQSLAALTRMHALKTG
ALIRAAVRMGALCGHAPEARLAQLDDFADALGLAFQVRDDILDVEASSEQLGKTAGKDQA
QDKSTFPALLGMDGAKAHLRELAARMQSVLAGHGEEADALRALATLAVERDH
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgacggctgaagcgcagttcgcgcgctggcgcgaccgtatcgaaagccagctcgacgcc
gccctgccctcgccggccgacgcgccgcaacgcctgcaccaggcgatgcgctattcggta
ctgggcggtggcaagcgcatgcgcccgctgctggtgtatgccagtggccagctgttcggc
gcaatgctggaccagctcgatgccgccgccatggcggtggagatgatccacgcctattcg
ctggtgcatgacgacctgccggcgatggacgacgacgccctgcgtcgcggcaagcccacc
acccatatcgccttcgacgaggccactgcgattctcgctggcgatgccctgcagacccgt
gcgttcggcctgctggccgatgcaccgctgccggccagcctgcgcgtggcctgcctgcag
accctggcccacgcctccggtgcgtccggcatgtgcggtggccaggcactggatatcgat
gccaccggccagcagcagtcgctggccgcgctcacccgcatgcacgcgctgaagaccggt
gcgctgatccgcgcggcggtgcgcatgggcgcgctgtgcggccacgcccccgaggcacgg
ctggcccagctggatgacttcgccgatgcgctcggcctggctttccaggtgcgcgatgac
atccttgatgtcgaagccagttccgagcagctgggcaagaccgctggcaaggatcaggcg
caggacaagagcaccttcccggccctgctgggcatggacggtgccaaggcgcacctgcgt
gaactggcggcgcgcatgcagtcggtgctggccggccatggcgaagaggccgacgcactg
cgtgcgctggcgacgctggcggtggaacgcgatcactga
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