KEGG   Scytonema sp. HK-05: SAMD_41540
Entry
SAMD_41540        CDS       T09974                                 
Name
(GenBank) RNA polymerase sigma-37 factor
  KO
K03090  RNA polymerase sigma-B factor
Organism
scyt  Scytonema sp. HK-05
Brite
KEGG Orthology (KO) [BR:scyt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:scyt03021]
    SAMD_41540
Transcription machinery [BR:scyt03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     SAMD_41540
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r3 Sigma70_r4 HTH_7 HTH_23 Sigma70_ECF HTH_Crp_2 HTH_24 LacI
Other DBs
NCBI-ProteinID: BAY46542
LinkDB
Position
4809791..4810564
AA seq 257 aa
MTASQFSIQFDGMELLRLYHQNRCIKTRNQLVQLHTGLVRKMAHKFSHQCNEPYEDLEQI
GYFGLIRAIERFDPRQGYAFSSFAIPYIRGEMLHFLRDRGTLLKIPRRWQELYNEGQRVR
KELAGTLGRPPKDSEIASVLKVSVQEWQETKLAVQNRMPLSLDATIVQNIDCQITLGEAL
PCQRSVAVQQQDEERQQLQGAINMLEEKPRMAVEMVYLKELSRKDTAKNIGTSPMTVTRY
LQKGVQDLVSMLRPQAV
NT seq 774 nt   +upstreamnt  +downstreamnt
atgacagcaagtcagttttctatccaatttgatggtatggaattattacggttataccat
caaaatcgttgtattaaaactcgtaatcaacttgtacaattacatactggcttagtacga
aaaatggctcataaattcagtcatcaatgcaatgagccatatgaagatttagagcaaatt
ggttattttggtttgataagagcaattgagcgctttgatccaagacaaggatatgctttt
agttcgtttgccataccctacattcggggtgaaatgctgcactttttacgcgatcgcggt
accctattaaagattcctcgccgttggcaagaactctataatgaggggcaaagagttcgc
aaagaattggctgggactttaggtcgtcctcccaaagattcagaaattgcaagcgttctc
aaggtatctgtccaagaatggcaagaaaccaaattagctgttcaaaaccgtatgcctttg
agtttggacgctacgatagttcaaaacattgattgccaaattaccctaggtgaagcactt
ccttgtcaacgttctgttgctgtgcaacaacaagacgaagaacggcaacaacttcaagga
gcaataaatatgctagaagaaaagccccgcatggcagttgaaatggtgtatttgaaggaa
ctttctcgcaaagataccgctaagaatattggcacgagtccaatgacagtgacacgatat
ttgcaaaagggagttcaagatttagtctctatgttaagaccgcaagcggtgtag

DBGET integrated database retrieval system