Streptomyces sp. CFMR 7: ABE83_22690
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Entry
ABE83_22690 CDS
T04074
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
scz
Streptomyces sp. CFMR 7
Brite
KEGG Orthology (KO) [BR:
scz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scz03021
]
ABE83_22690
Transcription machinery [BR:
scz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ABE83_22690
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_Crp_2
MarR_2
HTH_23
HTH_24
HTH_3
MarR
HTH_28
PNRC
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
ALC29554
UniProt:
A0A0M4DJG8
LinkDB
All DBs
Position
complement(5401463..5402434)
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AA seq
323 aa
AA seq
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MSPRLDEARTRDASSACPQGPTNSDSPAASALPGPRAGTTSTTPESHGEGLEGFTGLEGL
PEIPPYAEVGALDARALSKTLFERLESLEEGTHEYAYVRNTLVELNLALVKFAASRFRSR
SEPMEDIVQVGTIGLIKAIDRFELSRGVEFPTFAMPTIVGEIKRFFRDTSWSVRVPRRLQ
ELRLDLAKAGDELSQQLDRAPTVAELSERLGITPDEVVEGMSASNAYTASSLDAKPEEDD
GEGALADRIGYEDHGLEGIEYVESLKPLIAALPSRDRMILSLRFVSNMTQSEIGEELGIS
QMHVSRLLSRTLIKLRKGLTLEE
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccccggctcgacgaagcgcgtacccgcgacgcgtcgtcggcatgtcctcaggga
ccgaccaattccgactcccccgccgcgagcgccctcccgggcccgcgcgccggcaccacc
agcaccacccccgaatctcacggcgaggggcttgagggcttcacggggctcgaaggactt
cccgagatcccgccctacgccgaagtgggggccctggacgccagggccctgtcgaagacg
ctcttcgagcgcctcgaatccctcgaagagggcacgcacgagtacgcgtacgtccgcaac
acgctcgtcgagctgaacctcgcgctcgtcaagttcgccgcctcccggttccgctcgcgc
agtgaaccgatggaggacatcgtccaggtcggcaccatcggcctgatcaaggcgatcgac
cggttcgagctgagccgcggtgtcgagttcccgacgttcgcgatgccgaccatcgtcggt
gagatcaaacgattcttccgcgacaccagctggtccgtgcgcgtcccgcgccggctccag
gagctccggctcgacctggccaaggccggggacgaactctcccagcagctggaccgcgcg
cccaccgtggcggagctgtccgagcgcctgggcatcacgccggacgaggtcgtcgagggc
atgtccgcgagcaacgcgtacaccgccagctcgctggacgccaagcccgaggaggacgac
ggcgagggcgccctcgcggaccgcatcggctacgaggaccacgggctcgaaggcatcgag
tacgtcgagtccctgaagccgctgatcgccgcgctgccctcgcgggaccgcatgatcctc
tcgctccgcttcgtcagcaacatgacgcagtcggagatcggggaggagctgggcatctcc
cagatgcacgtgtcccgtctgctctcccggacgctgatcaagctccgcaagggactgacc
ctggaggagtag
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