Staphylococcus debuckii: CNQ82_07875
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Entry
CNQ82_07875 CDS
T07127
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
sdb
Staphylococcus debuckii
Pathway
sdb03030
DNA replication
sdb03430
Mismatch repair
sdb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sdb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CNQ82_07875 (holA)
03430 Mismatch repair
CNQ82_07875 (holA)
03440 Homologous recombination
CNQ82_07875 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sdb03032
]
CNQ82_07875 (holA)
03400 DNA repair and recombination proteins [BR:
sdb03400
]
CNQ82_07875 (holA)
Enzymes [BR:
sdb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CNQ82_07875 (holA)
DNA replication proteins [BR:
sdb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CNQ82_07875 (holA)
DNA repair and recombination proteins [BR:
sdb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CNQ82_07875 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DUF1456
DisA-linker
RNA_lig_T4_1
Sigma54_activ_2
SANT_DAMP1_like
Motif
Other DBs
NCBI-ProteinID:
AYU55375
UniProt:
A0A3G4QYF6
LinkDB
All DBs
Position
complement(1669022..1670002)
Genome browser
AA seq
326 aa
AA seq
DB search
MNENIITIYGEVPELIEKKTKEIADNYLQEPKDDFNYVNFNLADTEITTCIEEILTLPFL
SDKKVVVIKNAYLFTGEKGPKDINQNIDQLFEFIQKYDGSTLVIFEVYHSKLDERKKLVK
TLKKETKLIKIEQMTEDEMKNWIKNELNQQYKDIKQDALNLFIELTGINFNLIKQELEKI
ILFIGERPTITKQDVETIVNRSLEQNVFLLTDYIQKGQKEEAVNLVNDLIIMKEEPIKLL
ALITSNFRLYYQCKILGKKGYSQQQIAKTVGAHPFRVKLALRTSRQYQLNHLMEIINACA
ETDYKLKSSYMDKQLILELFILSIWA
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgaaaacattataacaatttatggtgaagtacctgaactaatcgagaaaaaaaca
aaggaaatagctgacaactacttacaagaacccaaagatgattttaattacgtaaatttt
aatttagcagacacagaaatcactacttgcatcgaagaaattttgacgcttccattttta
tcagataaaaaggtagtagtcataaaaaatgcatatttattcactggagaaaaaggtcct
aaagatattaatcaaaatattgatcagttatttgaatttattcaaaaatatgacggctct
actttagtgatttttgaagtataccattctaagttggatgagcggaaaaaattagttaaa
acactaaaaaaagaaacgaaacttatcaaaattgaacagatgaccgaagacgagatgaag
aattggataaaaaatgagttaaaccaacaatacaaagatattaagcaagatgctttaaat
ttattcattgaattgacaggaattaattttaatttaataaagcaagaattagaaaaaatc
attttatttataggtgaaaggcccactatcactaaacaagacgtggaaacaattgtgaat
agaagtctagaacaaaatgtttttttactgacagattatattcaaaaagggcaaaaagag
gaagctgttaatttagtcaatgacttgattattatgaaagaggaaccaatcaaattactt
gctttaataactagtaatttcagactttattatcaatgtaagattttaggaaaaaaagga
tatagccagcaacaaattgctaaaacagtaggggcgcatcctttccgagttaaattagcg
ctcagaacatcacgtcaatatcaattaaatcacttaatggaaattataaatgcctgcgca
gagactgattataaattgaaatcttcttatatggataaacagttgattcttgagctcttt
attttatctatttgggcataa
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