Streptomyces deccanensis: L3078_10950
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Entry
L3078_10950 CDS
T08215
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sdec
Streptomyces deccanensis
Pathway
sdec00040
Pentose and glucuronate interconversions
sdec01100
Metabolic pathways
sdec02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sdec00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
L3078_10950
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
L3078_10950
Enzymes [BR:
sdec01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
L3078_10950
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
ULR49775
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Position
complement(2451787..2453100)
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AA seq
437 aa
AA seq
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MRPRIWHAHVMTSVVGCTALVLGVAGTGVAQAQGQGRDLGRQVLGAGDGWGSAEGGTTGG
SAADAEHIYTVTTWAEFKAALAAGGNAPKIIKVKGMIDAVSEGCEAFVTGGYDLQQYLKD
YDPATYGNDQVAKGPQEDARVASMANQDSAIKANIPSNTTIVGVGKNSGILGGSLQIKGV
SNVIMRNLTIEAPLDCFPKWDPTDDNNTGNWNSEYDAVVVFGTDHVWLDHNTFTDGRYPD
SERPVYFGKVFQQHDGLTDIVRGSNYVTVSWNRFQDHDKNMLIGNSDGTAALDAGKLKVT
MHHNRFDGILQRSPRVRFGQVDVYNNHYVVTEEQKDDYYIFGVGLSSQLHASDNAITLPA
GASVGKALKRWNDSPLTAENNYVNGRLTDLIAVHNAEIPSEFLRSGAGWTPTLRTKVDSP
RAVPGIVANRAGAGKVC
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcctcgtatctggcatgcccatgtcatgacatccgtcgtcggctgcaccgcgctc
gtgctcggggtcgccggtaccggtgtcgcccaggcccagggccagggccgtgatctcggc
cggcaggtgctcggcgccggtgacgggtggggctcggcggaaggtggcaccaccggtggg
tcggcggccgacgccgagcacatctacaccgtcaccacctgggccgagttcaaggccgcg
ctggccgccggcggaaacgcgccgaagatcatcaaggtgaaggggatgatcgacgccgtc
tccgaggggtgcgaggccttcgtcaccgggggctacgacctccagcagtacctgaaggac
tacgacccggccacctacggcaacgaccaggtcgccaagggcccgcaggaggacgcgcgg
gtcgcgtccatggccaaccaggactcggcgatcaaggccaacatccccagcaacaccacc
atcgtcggcgtcggcaagaactccggcatcctcggcggcagcctccagatcaagggcgtc
tcgaacgtcatcatgcgcaacctcaccatcgaggccccgctcgactgcttccccaagtgg
gacccgacggacgacaacaacaccggcaactggaactccgagtacgacgccgtggtcgtc
ttcggcaccgaccacgtctggctcgaccacaacacgttcaccgacgggcggtaccccgac
agcgagcggccggtctacttcggcaaggtgttccagcagcacgacggcctgaccgacatc
gtgcgcggctccaactacgtgaccgtctcctggaaccgcttccaggaccacgacaagaac
atgctgatcggcaacagcgacggcaccgccgccctcgacgctggcaagctcaaggtcacc
atgcaccacaaccgcttcgacgggatcctccagcgctccccgcgtgtgcggttcggccag
gtcgacgtctacaacaaccactacgtcgtcaccgaggagcagaaggacgactactacatc
ttcggtgtcggcctgtcctcgcagctccacgccagcgacaacgcgatcacgctgcctgcg
ggcgcgagcgtcggcaaggccctgaagaggtggaacgactccccgctgaccgccgagaac
aactacgtcaacggcaggctgacggacctcatcgccgtccacaacgccgagatcccctcg
gagttcctccgctccggcgccgggtggacgcccaccctgcggaccaaggtcgactcgccg
cgcgcggtgccgggcatcgtcgcgaaccgcgcgggcgccgggaaggtctgctga
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