Staphylococcus devriesei: Q2T90_07960
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Entry
Q2T90_07960 CDS
T09366
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
sdev
Staphylococcus devriesei
Pathway
sdev03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sdev00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Q2T90_07960 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdev03021
]
Q2T90_07960 (rpoB)
03400 DNA repair and recombination proteins [BR:
sdev03400
]
Q2T90_07960 (rpoB)
Enzymes [BR:
sdev01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Q2T90_07960 (rpoB)
Transcription machinery [BR:
sdev03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Q2T90_07960 (rpoB)
DNA repair and recombination proteins [BR:
sdev03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Q2T90_07960 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
DUF7033
ATP-grasp_6
Motif
Other DBs
NCBI-ProteinID:
WKU12688
LinkDB
All DBs
Position
1628314..1631865
Genome browser
AA seq
1183 aa
AA seq
DB search
MAGQVVQYGRHRKRRNYARISEVLELPNLIEIQTKSYDWFLKEGLLEMFRDISPIEDFTG
NLSLEFVDYRLGEPKYDLEESKNRDATYAAPLRVRVRLIIKETGEVKEQEVFMGDFPLMT
NTGTFVINGAERVIVSQLVRSPSVYFNEKIDKNGRENYDATIIPNRGAWLEYETDAKDVV
YVRIDRTRKLPLTVLLRALGFSNDQEIIDLLGDSEYLRNTLEKDSTENTEQALLEIYERL
RPGEPPTVENAKSLLYSRFFDPKRYDLASVGRYKANKKLHLKHRLFNQKLAEPIVNSETG
EIVAEEGTVLDRRKLDEIMEVLETNANSEVFELEGSVIDEPVEIQSIKVYVPNDEEARTT
TVIGNALPDSEVKCITPADIIASMSYFFNLLNGIGYTDDIDHLGNRRLRSVGELLQNQFR
IGLSRMERVVRERMSIQDTDSITPQQLINIRPVIASIKEFFGSSQLSQFMDQANPLAELT
HKRRLSALGPGGLTRERAQMEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSYARVNEFG
FIETPYRKVDLDTNSITDQIDYLTADEEDSYVVAQANSRLDENGRFLDDEVVCRFRGNNT
VMAKEKMDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLMNTEAPFVGTG
MEHVAARDSGAAITAKHRGRVEHVESKEILVRRLVEENGTEHEGELDRYPLAKFKRSNTG
TCYNQRPIVSIGDVVEYNEILADGPSMELGEMALGRNVVVGFMTWDGYNYEDAVIMSERL
VKDDVYTSIHIEEYESEARDTKLGPEEITRDIPNVSENALKNLDERGIVYVGAEVKDGDI
LVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGAGGIVLDVKVFNREEGDDT
LSPGVNQLVRVYIVQKRKIHVGDKMCGRHGNKGVISKIVPEEDMPYLPDGRPIDIMLNPL
GVPSRMNIGQVLELHLGMAAKNLGIHVASPVFDGASDEDVWSTIEEAGMARDGKTVLYDG
RTGEPFDNRISVGVMYMLKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEV
WALEAYGAAYTLQEILTYKSDDTVGRVKTYESIVKGENISRPSVPESFRVLMKELQSLGL
DVKVMDEQDNEIEMADVDDEDATERKVDLQQKDVPETQKETTD
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
ttggcaggtcaagttgtccaatatggaagacatcgtaaacgtagaaactatgcgagaatt
tcagaagtgttagaattaccgaacttaatagaaattcaaactaaatcttacgactggttc
ctaaaagaaggtttattagaaatgttccgtgatatttctccaattgaagatttcactggc
aacctttctttagaatttgtagattatcgattaggtgaaccaaaatacgatttagaagaa
tcgaaaaaccgtgacgctacttatgctgcacctcttcgtgttagagtgcgtctaattatt
aaagaaactggcgaagttaaagaacaagaagtatttatgggtgatttcccattaatgact
aatacaggtacgttcgtaattaacggtgcagaacgtgttatcgtttcacaattagttcgt
tcaccatcagtatacttcaatgaaaaaatagataaaaacggtcgtgaaaactacgatgca
acaattattcctaaccgtggtgcgtggttagaatatgaaacagatgctaaagatgtagtc
tatgtacgtatcgatagaacacgtaaattaccattaacagtattattacgtgctttaggt
ttctctaatgatcaagaaatcattgatttacttggtgatagtgaatacttacgtaataca
cttgaaaaagatagcactgaaaatacagaacaagcactactagaaatttatgaacgttta
cgtcctggtgaaccaccaacagtggaaaatgctaaaagtctattatactcacgctttttc
gacccaaaacgttatgatttagctagtgttggtcgatacaaagctaataaaaaattacac
ttaaaacatcgtttatttaatcaaaaattagctgaaccaatcgttaatagcgaaactggt
gaaattgttgctgaagaaggcacagttttagaccgtcgtaaattagacgaaattatggaa
gttttagaaacgaatgcgaatagtgaagtgtttgaattagaaggtagcgtaattgacgaa
cctgtagaaattcaatcaatcaaagtctatgtgcctaatgatgaagaagcacgtacaact
actgtaatcggtaatgcgttaccagattcagaagttaaatgtattacacctgctgacatc
attgcatcaatgagttatttctttaacttattaaatggtattggctatacagatgatatt
gaccatctaggtaatcgtcgtttacgttcagttggcgaacttttacaaaaccaattccgt
attggtttatctagaatggaacgtgttgtacgtgaaagaatgtctattcaagacactgac
tcaatcactccacaacaattaattaatattcgtcctgtaattgcatcaattaaagagttc
ttcggtagctctcaattatcacaattcatggaccaagctaacccattagccgagttaaca
cataaacgtcgtctttctgcattaggacctggtggtttaacacgtgaacgtgctcaaatg
gaagtacgtgacgttcactattctcactatggccgtatgtgtccaatcgagactccagag
ggaccaaacatcggattaatcaactcattatctagttatgcacgtgtaaacgagtttggt
tttatcgaaacgccatatcgtaaagtagatttagacactaactctattactgatcaaatt
gattatttaactgcagacgaagaagatagttatgttgttgcccaagcgaactctcgctta
gatgaaaatggtcgtttcttagatgacgaagtagtttgtcgtttccgtggtaataacaca
gttatggctaaagaaaaaatggactacatggatgtatctcctaaacaagttgtttcagct
gcgacagcatgtatcccattcttagaaaacgatgactctaaccgtgcattaatgggtgcc
aacatgcaacgtcaagcggtaccattgatgaatactgaagcgccattcgttggtacaggt
atggaacacgtagctgctcgtgactctggtgctgcaatcacagcgaaacacagaggacgc
gtagaacacgttgaatctaaagaaattttagttcgtcgtttagtagaagaaaacggtact
gaacatgaaggtgaattagaccgttatccattagctaaatttaaacgttcaaatacaggt
acttgttacaaccaacgcccaattgtttcaattggcgatgtagttgaatacaacgaaatt
ttagctgatggcccttcaatggaattaggtgaaatggccttaggtcgtaacgtagtcgtt
ggtttcatgacttgggacggttataactatgaggatgctgtaatcatgagtgaacgttta
gttaaagatgacgtttatacttcaattcatatcgaagaatatgaatcagaagctcgtgat
actaaactaggacctgaagaaattacacgcgatatccctaacgtttctgaaaatgcactg
aaaaacttagacgaacgcggtattgtctacgttggtgctgaagttaaagacggtgacatc
ttagtaggtaaagtaacgcctaaaggtgtaactgaattaacagctgaagaacgattatta
catgcgatcttcggtgaaaaagcacgtgaagtgcgtgatacttcattacgtgtaccacat
ggtgcaggcggtatcgttctagacgtaaaagtcttcaatcgcgaagaaggcgatgatacg
ttatctccaggtgtaaaccaacttgtacgtgtttacatcgttcaaaaacgtaaaattcat
gttggggataaaatgtgtggtcgtcacggtaataaaggggttatctctaagatcgttcct
gaagaagatatgccttacttaccagatggacgtccaattgatatcatgttaaacccactt
ggtgtaccatctcgtatgaacatcggacaagtattagaattacacttaggtatggctgct
aagaacttaggcatccacgttgcatctccagtatttgatggtgcgagtgacgaagatgta
tggtcaacaatcgaagaagcaggtatggcacgtgacggtaagactgtcttatatgacgga
cgtactggtgaaccatttgataaccgtatttctgttggtgtaatgtacatgcttaaactt
gcccacatggttgatgacaagttacatgcgcgttcaactggtccatactcacttgttaca
caacaaccgcttggtggtaaagcacaattcggtggacaacgtttcggtgaaatggaggta
tgggcacttgaagcttatggtgctgcatacacattacaagaaatcctaacttataaatct
gacgatacagtaggtcgtgttaaaacttatgaatctatcgttaaaggtgaaaacatctct
agaccaagtgttccagaatcattccgcgtattgatgaaagaattacaaagtttaggttta
gatgtcaaagtgatggacgagcaagataatgaaatcgaaatggcggacgttgatgacgaa
gatgcaactgaacgcaaagtagatttacaacaaaaagatgttccagaaacacaaaaagaa
actactgactaa
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