Streptococcus dysgalactiae subsp. equisimilis ATCC 12394: SDE12394_04030
Help
Entry
SDE12394_04030 CDS
T02017
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
sdg
Streptococcus dysgalactiae subsp. equisimilis ATCC 12394
Pathway
sdg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sdg00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SDE12394_04030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdg03021
]
SDE12394_04030
Transcription machinery [BR:
sdg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SDE12394_04030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
DUF2004
DprA_WH
DUF2316
Motif
Other DBs
NCBI-ProteinID:
ADX24310
LinkDB
All DBs
Position
777635..778744
Genome browser
AA seq
369 aa
AA seq
DB search
MTKEKEITTFNVQVAEFIRHHKKEGTAIDDDVTEKLVIPFALDADQIDDLLERLTDGGIS
ITDKEGNPSSKYIVEEPKPEELTDEELIGSNSAKVNDPVRMYLKEIGVVPLLTSEEEKVL
AVAVAEGDLEAKQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVDKFDYSKG
FKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDPTPEQIA
ERMEMTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDYTTRVVLREQL
DEVLDTLTDREENVLRLRFGLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRHPSRS
KQLRDFIED
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagaaaaagaaattacaacttttaatgttcaagttgcggagtttattcgtcat
cataaaaaagaaggaacagctattgatgatgatgtgaccgaaaagcttgtcattccattt
gccttggatgctgatcaaattgatgacctccttgagcgtttgacggatggtggaatttct
attaccgataaagaaggcaacccatcgtctaaatacattgtggaagaaccaaaaccagaa
gagttaaccgatgaagaattaattggtagcaattctgctaaagtgaatgatcctgtccgc
atgtacctcaaagaaattggtgtggtaccacttttaacaagtgaagaagaaaaagtgttg
gcagtagcagttgcagaaggtgacctagaagctaaacaacgtctagcagaagctaaccta
cgtttggtagtttctattgccaagcgttatgttgggcgtgggatgcaattcttggacttg
attcaagaaggaaatatggggttaatgaaagctgttgataagtttgactattcaaaaggc
tttaaattctcaacctatgcgacttggtggattcgtcaggctattactcgtgctattgca
gaccaagctcgtacgattcgtattccagttcacatggtggaaaccattaacaaattggtt
cgtgaacaacgtaatctgttgcaagagttagggcaagacccgacaccagaacaaattgca
gagcgcatggaaatgactccagacaaggttcgtgaaattctaaaaattgctcaagaacct
gtttctttagaaacaccaattggggaagaagatgatagtcacttaggtgattttatcgaa
gacgaagtcattgaaaatcctgttgattatactactcgcgtggttctacgtgaacagtta
gatgaggttttggataccttgacagatcgtgaagaaaatgttcttcgcctacgctttgga
cttgacgatggtaaaatgcgcacccttgaagatgtgggtaaagtctttaacgttacccgt
gagcgtatccgtcaaattgaagctaaagcgcttcgcaaactccgccatccaagccgtagc
aagcaattaagagactttatagaggactaa
DBGET
integrated database retrieval system
