Sphingobacterium daejeonense: NCTC13534_00766
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Entry
NCTC13534_00766 CDS
T06632
Symbol
ffh_1
Name
(GenBank) Fifty-four homolog
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
sdj
Sphingobacterium daejeonense
Pathway
sdj02024
Quorum sensing
sdj03060
Protein export
sdj03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sdj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
NCTC13534_00766 (ffh_1)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
NCTC13534_00766 (ffh_1)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NCTC13534_00766 (ffh_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sdj02044
]
NCTC13534_00766 (ffh_1)
Enzymes [BR:
sdj01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
NCTC13534_00766 (ffh_1)
Secretion system [BR:
sdj02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
NCTC13534_00766 (ffh_1)
Eukaryotic Sec-SRP protein
NCTC13534_00766 (ffh_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP54_N
Zeta_toxin
CbiA
SRPRB
cobW
AAA_30
MMR_HSR1
APS_kinase
AAA_22
AAA_17
AAA_18
6PF2K
TsaE
AAA_33
AAA_24
nSTAND3
ATP_bind_1
Thymidylate_kin
AAA_23
DO-GTPase1
ABC_tran
AAA_31
Motif
Other DBs
NCBI-ProteinID:
VTP90221
LinkDB
All DBs
Position
1:655921..656955
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AA seq
344 aa
AA seq
DB search
MFSNLQDKLDRAFKVLKGQGNITEINVAETMKEIRKALLDADVNYKTAKSFTDEVKVKAL
GQNVLNSISPGQLLTKIMNDELTELMGGTVTELEITKNPTIILIAGLNGAGKTTFSGKLA
NFLKASKNKKPLLVAGDVYRPAAIDQLEVLGQQVGVPVYVDRESTDPIGIAVAGVEEAKR
NGNNIVIIDTAGRLAIDEALMNEITAVKEATQPHEILFVVDSMTGQDAVNTAKAFNDRLD
FTGVVLTKLDGDTRGGAALSIKSVVNKPIKFIGTGEKMEALDVFHPDRMASRILGMGDVV
SLVERAQQQFDEKEAAELQKKIRKNKFDFNDFNHRSSRSRRWVT
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgttttcaaatctacaggataaattagacagagcctttaaggttttaaaggggcagggt
aatattacggagatcaacgttgcggaaacgatgaaggaaattcgcaaggcattattggat
gccgatgtgaactacaagactgcaaaatcatttacggacgaagttaaagttaaggcttta
ggtcagaacgtattgaacagcatttctccgggtcaattattgaccaagatcatgaatgat
gagttgacggaattgatgggtggtacagttaccgaactggagatcacgaagaatccgact
attattttgattgctggtctgaatggtgctggtaagactactttttcgggtaaacttgct
aatttcttgaaagcatcgaaaaacaagaagccattattggttgctggtgacgtttaccgt
cctgctgcgattgatcaattggaagtattgggtcaacaagtcggtgttccagtatatgta
gatcgtgagtctactgatccgattggtattgctgttgccggtgttgaggaagcaaagaga
aacggaaataatatcgttatcatcgatactgctggtcgtctagctattgatgaggctttg
atgaatgagattactgctgtaaaggaagctactcaacctcacgagatcctttttgttgtt
gactccatgactggtcaggatgctgttaatacagcaaaggccttcaatgaccgtctggat
ttcacgggtgtagtattgaccaaattagatggtgatactcgtggtggtgctgccttatcg
attaaatcggtggtcaataaaccaatcaaatttatcggtacgggtgagaaaatggaggca
ttggatgtcttccacccagatcgtatggcatcccgtattttagggatgggtgacgttgta
tccttggtagaacgtgcacaacaacaatttgacgaaaaagaagctgcagaacttcagaag
aaaatccgcaaaaataaatttgatttcaacgacttcaatcacagatcaagcagatcaaga
agatgggtaacatga
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