Shewanella dokdonensis: KHX94_00860
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Entry
KHX94_00860 CDS
T07469
Symbol
nrdD
Name
(GenBank) anaerobic ribonucleoside-triphosphate reductase
KO
K21636
ribonucleoside-triphosphate reductase (formate) [EC:
1.1.98.6
]
Organism
sdk
Shewanella dokdonensis
Pathway
sdk00230
Purine metabolism
sdk00240
Pyrimidine metabolism
sdk01100
Metabolic pathways
sdk01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
KHX94_00860 (nrdD)
00240 Pyrimidine metabolism
KHX94_00860 (nrdD)
Enzymes [BR:
sdk01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.98 With other, known, physiological acceptors
1.1.98.6 ribonucleoside-triphosphate reductase (formate)
KHX94_00860 (nrdD)
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Gene cluster
GFIT
Motif
Pfam:
NRDD
Gly_radical
ATP-cone
Zn_ribbon_TiaS
Zn_Tnp_IS91
Motif
Other DBs
NCBI-ProteinID:
QVK23388
UniProt:
A0ABX8DF74
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Position
complement(170695..172812)
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AA seq
705 aa
AA seq
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MPVVIKRDGCRTQFDENRIRDAVLAASTHCGINDVDYAATVAAVVSAAVKEKQDVAIQEL
QDRVENLLMDGPYKAVARAYIEYRHDRDICRETGSKLSLEIRGLVEQTNTSLLNENANKD
AKVIPTQRDLLAGIVAKHYAKHHILPKDVVDAHERGEIHYHDLDYAPFFPMFNCMLIDLG
GMLNHGFKMGNAEIETPKSISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPFVTKSYE
KHMDVAQQWGIENAAAYAEERTEKECHDAFQSLEYEVNTLHTANGQTPFVTLGFGLGTSW
QSRLIQQSILKIRMEGLGKNHKTAVFPKLVFAIRDGVNHKPGDCNYDVKQLALRCSTLRM
YPDILNYDEVVRVTGSFKTPMGCRSFLGAYEQDGQLQHEGRNNLGVVSLNLPRIALEAKG
DEKAFYRILDQRLAIARKALDTRIERLKNVKARVAPILYMEGACGVRLKADDNIADIFKN
GRASISLGYIGVHEAINALYGTETHVYDSEQLRQKAVNIVAYLKAATVRWKEETGYGFSL
YATPSENLCNRFAKLDAKEFGLVPGVTDKGYYTNSFHLDVEKSVNPYDKIDFEQPYPEVS
NGGFICYGEYPNMQHNKEALENVWDYSYSRVPYYGTNTPIDECYDCGFTGEFSCTSKGFV
CPKCGNHDPARVSVIRRVCGYLGSPDARPFNQGKQEEVKRRVKHL
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgccagtagtgataaagagggatgggtgccgtactcagttcgatgaaaatagaatccgt
gatgcggtgctggcagcctcgacgcactgtggtattaacgatgttgactatgcagcaact
gttgcggcagttgtctctgcggcagtaaaagagaaacaggacgttgctattcaggaattg
caggatcgggttgaaaacctgctgatggatggcccctataaagctgttgcccgagcttat
atcgaataccgtcacgaccgtgacatctgccgtgaaaccggcagtaaactgagtctagaa
atccgcggactggtggaacagaccaatacttcgctgcttaacgaaaacgctaataaagac
gcgaaggtcattccaacccagcgcgacttgctggccgggattgtggccaaacactatgcc
aaacatcatattctgccaaaagatgtggttgacgctcatgaacgcggtgaaatccattat
cacgacctggactatgcgcctttcttccctatgttcaactgtatgttgatcgatctgggc
ggcatgctgaaccacggtttcaagatgggcaatgcggaaattgaaacccctaaatccatc
tctacagctaccgcggtgacggcacagattattgctcaggtggctagtcatatttatggt
ggtactaccatcaatcgcattgatgaagtactggcaccatttgtgacaaaaagttatgaa
aaacatatggatgttgcgcagcagtggggcatcgaaaatgcggctgcctacgcggaagaa
cgcaccgagaaagagtgtcacgatgctttccagtctttggaatatgaagtcaacacacta
cacaccgctaacggtcagacaccttttgtgaccttagggtttggtttgggtactagctgg
cagtcacgtttaatccaacagtcaatcctgaaaattcggatggaaggcttaggcaagaat
cataagactgcagtattcccgaaactggtatttgccatccgcgatggtgtcaatcataag
cccggcgactgcaactatgatgtaaaacagttagcgctgcgttgctctacgctgcggatg
tatccagatatcctgaactacgacgaagtggtgcgggtgaccggatccttcaaaacgcct
atgggatgtcgcagttttcttggtgcttacgaacaggatggtcagttgcagcatgaaggc
cgcaataacctcggcgtggtcagccttaatctgccgcgtattgctctggaagcgaaaggc
gatgaaaaggccttttatcggatcctggatcaacggctggcgattgcccgcaaagcgctg
gatacccgtattgaacgcttgaaaaatgtcaaagcacgggtagctccaatcctgtatatg
gaaggtgcctgtggtgtgcgtttgaaggcagatgacaacatcgccgatatcttcaagaat
ggccgcgcctctatttcactgggttatatcggggttcatgaagcgatcaacgcgctctat
ggcactgaaacccacgtttatgacagtgaacagttgcggcagaaggcggtaaacatcgtc
gcttatctgaaagcggctaccgtgcgctggaaagaggaaactggctatggtttcagcttg
tatgccactcctagtgaaaacctctgtaaccgttttgctaagttggatgccaaagaattt
ggattggtgcctggggtaactgacaagggatactacaccaacagttttcatctggatgtg
gaaaagtccgttaacccttacgataaaatcgactttgaacagccttatcctgaagtctct
aacggcggtttcatctgttatggtgaatacccgaacatgcagcataacaaggaagcgctg
gaaaatgtttgggactacagttacagccgcgttccctactatggcaccaatacgccaata
gatgaatgctacgactgtggctttactggtgaattcagttgtaccagtaaaggctttgta
tgtcctaagtgcggtaatcatgatcctgcccgagtttcggttatccgccgcgtatgtggt
tacttggggagcccagatgcccgtccgtttaaccaagggaaacaggaagaagttaaacgc
cgcgttaaacatctctga
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