Stegodyphus dumicola: 118196950
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Entry
118196950 CDS
T07385
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1-like
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
sdm
Stegodyphus dumicola
Pathway
sdm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sdm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
118196950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdm03021
]
118196950
Enzymes [BR:
sdm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
118196950
Transcription machinery [BR:
sdm03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
118196950
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
DUF7879
Motif
Other DBs
NCBI-GeneID:
118196950
NCBI-ProteinID:
XP_035224308
LinkDB
All DBs
Position
Unknown
AA seq
1662 aa
AA seq
DB search
MGENIYDTIKGLSFQTYTPQEIEKLSAVEVTNLVVLDNVGHPTPGGLYDLRFGPNEKDEL
CATCELNYFHCPGHVGHIKLPVCVFNPVFLPKLYQILKGSCYHCHKLFAPPLAVQLTLYQ
LRALDHGLLSLVQDLAEVASGGSEVIDATIVFKKLKEMFERALKEAKLGSTNQHVKSVVE
FRRNIVKDFIRNYMMKSISKCPHCKTPRKKMTLYKTRIVCTEGRVKLESEKDRGNKEITP
EKARDHMYILWKNQKDILQCLYRILAQEEKQQNVAVDIFFLSSVIVPPSRFRPLIVMKGK
KYADQQTLKFKDILSDCKLIQNIWRLAKRVDIDENEKALINKIPGKSEGDKFNYVYQSLQ
RHVAELFDCEQSKENFSKGIKQILEKKEGLFRMNMMGKRVNYAARSVISPDPYIQVNEIG
IPLVFAKKLTFPEPASQWNFEKLRQAVKNGPNIYPGASLIQKEDGKIVKLTGEPSQREAL
SKLLLTQQGSVIGGVKIVHRHIQDGDMLLLNRQPTLHKPSIMAHKARILPGEKTLRLHYA
NCKAYNADFDGDEMNAHLPQTYGGQAECRHIVNVNHQYLVPKDGTPLSGLIQDHIIAGTL
LTMRGRFFDRNDYEKLIYSALTFTRKRLKLLSPCIWKPEALWSGKQIVSSIIINLIPEDK
LPPTLEGKAKVSSKNWVREPVRDWKAGGTPLSGDNMSESEVIIRSGELLCGVIDKAQIGP
TPYSLIHVCYELYGGEISSVILTALARLFTHYLQFYSGFTLGIKDIVLTPKADKKRKKVL
KKTKAKGLIACANALEVENPEENIEKLLTKYKETHFNRDDFGLKVVDMEMKKVTHELNNK
INTICIPEGLKIKFPFNNLQLMVESGAKGSSVNAMQISCLLGQIELEGRRMPLMLNGCTL
PSFPAYDTSPEAGGFVTGRFLSSINPQEYFFHCMAGREGLIDTAVKTSRSGYLQRCLIKH
LEGVTVNYDLTVRDSDGSIVQFLYGEDGMDVGKMQLLKENQFHLLAKNYDAVINKEQLEM
LLDRKDSDMEKQKRKIKKWKKKHSSSEPRLSLINKTEIPPAFSDLKKRLQKILNEKQNID
EYVKKKFERKHGRCPDPVSSKFKPDVTFGSVTEKLESAISDYVARNPHGLLHYDTEDISG
KLSAEKFQDLCYYRAMKSLAEPGEAVGLLAAQSIGEPSTQMTLNTFHFAGKGEMNVTLGI
PRIREILMTASANIATPTMDLPLLDKPGIEEEAEKLRLQLAPVSLKEILEAIKVKEYISV
STNVSSIRSYIVKFKFLKYSEYKGYINTSPSKILHYMEHVFIKKILEVLKKKMKQSSSLD
FVGFMKDNIKKVEPNEDESEDVPQADDPTQLNEVESSEESEDEGDTISAKSKLHHKQEQE
YEDPEDEEMLPESNSETSDIETEISIKKEVRSSDEGENAAANPHEFKKTPKMTVSENDKA
LRVNYVKCIHHWIADYNFDSRYERWCEVTFQVSLDGCKIDMQSLLEEEVNKAYVHLVPEI
KDAILVKNPNAKDGSKLMLKTNGVNFLEIFKYVDIIDINKIYSNNIQAIAETYGIEAAAR
AIQKEIENVFAAYGIKVDPRHLSLISDYMTSSGAYRPCNRIGMEANASPLQQMTFETTRN
FLVDAMLLGIDDQLKSPSANIIAGKQVRAGTCAFDLCPKFGR
NT seq
4989 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaaatatatatgacactatcaagggactctccttccagacttatacacctcaa
gaaattgagaagcttagtgctgttgaagttacaaatcttgtagttttggacaatgtcggg
catccaactccaggaggattatatgatctccgctttggacccaatgaaaaagatgagtta
tgtgctacatgtgaattaaattacttccattgccctggccatgttggtcacattaagttg
ccagtgtgtgtgtttaatccagtatttttacctaaattgtatcagattttgaaaggttca
tgttatcactgtcacaagctttttgcgccacctcttgccgttcagttaactctgtatcag
ttaagggcattggatcatggtttacttagtcttgtgcaagatctggctgaagtggcatct
ggtggaagtgaagttatagatgcaactattgtttttaaaaagttaaaggaaatgtttgaa
agggctctcaaagaagcaaaacttgggagcacaaatcagcatgtcaaaagtgtggtggaa
tttcgaagaaacattgttaaagattttataagaaattacatgatgaagtctatttctaaa
tgcccacattgcaaaacacctcggaaaaaaatgactttatataagacaagaattgtttgc
acagaaggaagagtaaaattagagtcagaaaaggacagaggaaataaagaaataacaccc
gaaaaggcaagggatcatatgtatattttgtggaaaaatcagaaagatatcctgcagtgc
ttatacagaatccttgctcaagaagaaaaacagcagaatgttgcagttgatatatttttc
ctgagttcagttattgtacctccttcaagatttcggccgctgattgttatgaaaggtaaa
aaatatgctgatcaacaaaccctgaaattcaaagatattctcagtgattgtaaacttatc
caaaatatatggagacttgctaagcgtgtagatattgatgaaaatgaaaaggcattaata
aataaaattcctggcaaatctgaaggagacaagtttaattatgtgtatcaatctttacaa
aggcatgtagctgaactgtttgattgtgagcaaagtaaagaaaacttttcaaaaggcatc
aaacaaatccttgaaaagaaagaaggtttatttcgtatgaatatgatgggtaaaagagtt
aattatgcagcaagatctgtgatctcacctgatccatacatacaagtaaatgaaattggc
attcctttggtatttgcaaagaaactaacttttcctgagcctgcttcacagtggaatttt
gaaaaattgcgtcaagctgttaaaaatggaccgaacatttatccaggagcttcattaata
cagaaagaagatggaaaaattgtaaaattgactggtgagccttcacaacgtgaggcttta
tcaaagctccttcttactcaacaaggaagtgttataggtggagttaaaattgttcacagg
cacattcaagatggagacatgttgttattaaatcgacaacccaccttgcataagccaagt
attatggctcataaggcacgcatccttcctggtgaaaaaaccctcaggctacattatgca
aactgcaaagcatataatgcagattttgatggggatgagatgaacgctcatttgcctcag
acttatggcggacaggctgagtgtcgccatattgtaaatgtaaaccaccagtatcttgtg
ccaaaagatggtacccctcttagtggtttgattcaggatcacattattgcaggcactttg
ctaacaatgagaggacgtttttttgacagaaatgactatgaaaagctaatatatagtgca
ttgacttttacaaggaaacgcttaaaacttttgtccccatgtatttggaagcctgaggct
ctgtggtccggaaaacagattgtatccagtattattattaatcttataccagaagataaa
ttgccaccaactcttgaaggaaaagctaaagtctcctcaaaaaattgggtgagagaacct
gttagagattggaaagcaggtggtactcctttgtctggggataacatgagcgagtcagaa
gtaataataagatcaggtgaacttttatgtggtgtaatagacaaagctcaaattggacca
acaccctacagtcttattcatgtttgttatgagttgtatggtggagaaatatcaagtgtt
atccttactgctctagcgcgattatttactcattatttgcagttttattcaggctttact
cttggtattaaagatattgttctcactccaaaggctgataagaaaaggaaaaaggttctt
aagaaaacaaaggctaaaggtttgattgcatgtgctaatgccctagaagttgaaaatcct
gaagaaaatatagaaaagttattaactaagtataaggaaacccattttaacagagatgat
tttggactaaaagtggtagatatggaaatgaagaaagttacccatgagcttaataataaa
ataaatacgatttgtataccagagggcttaaagatcaagtttccatttaataatctgcag
ttgatggttgagtcgggagcaaaaggctcttcggtaaatgctatgcagatatcttgcctg
ttaggtcagattgaattagaaggacgtcgaatgccattgatgttaaatggttgtacttta
ccatcattcccagcttatgatacttccccagaagctggaggatttgttacagggcgcttt
ttgtccagcataaatccgcaagaatacttttttcattgcatggctggtcgagaaggcttg
attgatacagctgtgaagacaagtcgtagtggttatttacagagatgccttataaaacat
ttagaaggtgttactgtgaattatgaccttactgtgagagacagtgatggttcaattgtt
cagtttttatatggagaagatggcatggatgtggggaaaatgcagctgctgaaagaaaat
caatttcatttactagcaaaaaattatgatgctgtcataaataaagaacaacttgaaatg
ttgttagatcgaaaagattcagacatggaaaagcaaaaacgaaaaataaagaaatggaaa
aaaaaacacagttcttcagagcctcgcttatcactgataaataagactgaaattccacca
gcattttctgatttgaaaaagagacttcaaaaaatattgaatgaaaagcagaatattgat
gaatatgtcaaaaaaaagtttgaacgaaaacatggtagatgtcccgacccagttagttct
aagtttaaacccgatgtaacatttggatctgtaacagaaaaattggagtcagcaatttct
gattatgtagcaagaaaccctcatggacttcttcattatgatactgaagatatttcagga
aagttatcagctgagaaatttcaggatttgtgttattatcgagctatgaaatctttagct
gaacctggtgaagcagttggtctcttagctgctcagtctattggggagccatctactcaa
atgacactgaatactttccattttgctggaaaaggtgagatgaacgttaccttgggtatt
cctcgtatccgtgaaattttgatgactgcaagtgcaaatattgctactccaactatggat
ttgcctcttcttgataaaccggggattgaagaagaagctgaaaagctaaggcttcaacta
gctcctgtttctttgaaagaaattcttgaagctattaaagtgaaggaatatatttctgta
tctacaaatgtatcaagtataagaagttacattgtaaaatttaaattcttaaagtattca
gaatataagggatacataaatacatcaccatcaaaaattctacactacatggaacatgta
tttataaagaaaatcttagaagttcttaagaagaaaatgaaacagtcttcatctttagat
tttgttggttttatgaaagataatataaaaaaagtagagccaaatgaggatgagtcagaa
gacgttcctcaagctgatgacccaacacaattaaatgaagtagaaagctctgaagaaagt
gaagatgaaggagacaccatttcagctaaatctaagttgcatcataagcaagaacaagag
tatgaagatccagaagatgaagaaatgcttcctgaatctaattcagaaacttctgatata
gaaacagaaatcagtataaagaaagaggttaggagctctgatgaaggagaaaatgctgca
gcaaatcctcatgagtttaaaaaaactcccaaaatgactgtcagtgaaaatgataaagct
ttacgtgttaattatgtaaaatgcattcatcattggatcgcagattataattttgattcc
cgctatgaaagatggtgtgaggtgacctttcaggttagcttagatggttgtaaaatagac
atgcaaagtcttcttgaagaagaagtaaataaagcttatgtgcatttagttcccgaaatc
aaagatgcaatattagtcaaaaatcctaatgccaaagatgggtctaaattaatgctgaag
actaatggtgttaacttcttggaaattttcaagtatgttgatattatagacatcaataaa
atttatagcaacaacatccaggctatagctgagacatatggtattgaagcagcagcaaga
gccatacagaaggaaattgagaatgtgtttgctgcatatggtataaaggttgaccctcgc
cacttatctctgatatcagactatatgacatctagtggagcttatcgcccatgtaataga
ataggcatggaagcaaatgcttcacctttacaacagatgacatttgagacaacaagaaat
ttcctggttgatgccatgcttttaggtatcgatgatcaacttaaatcaccatctgccaac
attattgctggaaaacaggttagagctggcacatgtgctttcgacctttgtcctaaattt
ggacgttaa
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integrated database retrieval system
