Shewanella denitrificans: Sden_0835
Help
Entry
Sden_0835 CDS
T00344
Name
(GenBank) glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
sdn
Shewanella denitrificans
Pathway
sdn00260
Glycine, serine and threonine metabolism
sdn00630
Glyoxylate and dicarboxylate metabolism
sdn00785
Lipoic acid metabolism
sdn01100
Metabolic pathways
sdn01110
Biosynthesis of secondary metabolites
sdn01200
Carbon metabolism
Module
sdn_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Sden_0835
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Sden_0835
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Sden_0835
Enzymes [BR:
sdn01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
Sden_0835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
ABE54124
UniProt:
Q12R02
LinkDB
All DBs
Position
956295..959249
Genome browser
AA seq
984 aa
AA seq
DB search
MPRRIGLRRLRLRLADLEYKFIMTKQTLTQLEQHELFLTRHIGPNAAQQQEMLSFVGAES
LDDLTAQTVPGAIRLPQDLTIGDSCGEAEGIAYIRNIADKNKVFKSYIGMGYYGVQVPNV
ILRNVFENPGWYTAYTPYQPEIAQGRLEAILNFQQMSMDLTGLDLASASLLDEASAGAEA
MALAKRVSKAKKANIFFVADDVFPQTLDVVQTRAECFGFEVVVGPAADAVNYELFGALFQ
YSNRHGQISDFTALFSELRAKNVVVTVAADLMALMLLKSPGAMGADVVFGSAQRFGVPMG
YGGPHAAFFVARDEHKRSMPGRIIGVSKDTRGNMALRMAMQTREQHIRREKANSNICTAQ
ILLANMASFYAVFHGPQGLKTIATRINRLADILAFGLKAKGLSLVNDAWFDTVSVKGADI
GAIQARAIAAGINLRIDADGVFGISLDETTLRSDIADLFDAILGAGHGLDVAAIDAQLVA
ANSSSIPAALVRTDAVLTHPTFNRYQSETEMMRYIKRLENKDLALNHSMISLGSCTMKLN
AAVEMLPVSWPEFANMHPFCPLDQAEGYTQLINELSEYLVKITGYDAVCIQPNSGAQGEY
AGLLAIKKYHESRGDAHRDICLIPQSAHGTNPASAQLAGMKVVVTACDKQGNVDLDDLRA
KASELADSLSCIMITYPSTHGVYEESIREVCDIVHQYGGQVYLDGANMNAQVGLTSPGFI
GADVSHLNLHKTFAIPHGGGGPGMGPIGVKSHLAPFVAGHTVVKPGRESDHNGAVSAAPY
GSASILPISWMYIKLLGTKGIKQSTQTALLNANYVMKKLSAHYPVLFTGRNDRVAHECII
DLRPLKEASGVTEMDIAKRLNDYGFHAPTMSFPVAGTLMIEPTESESKVELDRFIEAMVS
IRGEIAKVESGEWPVDNNPLHNAPHTMADIMDPEFDSRPYSREVAVFPSAAVKANKFWPT
VNRIDDVYGDRNLMCSCVPLSDYE
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgcccagacgcataggactaagacgcctaagactaagactggcagatttggaatataag
tttatcatgaccaagcaaacgcttacccagctagagcaacacgaactcttcttaacccgt
catatcggcccaaatgctgctcagcagcaagaaatgctgagttttgtcggcgcagagtcc
ttagacgatctcaccgcacaaactgtgccgggtgccattcgtctacctcaagatctcacc
ataggtgattcttgtggtgaagccgaaggcatagcctatatccgcaacatagccgacaag
aacaaagtctttaagagctatatcggtatgggttattacggggtgcaagtgccaaacgtc
atcttgcgtaacgtgtttgaaaacccaggttggtacacagcttataccccttatcagcca
gaaatcgctcagggccgtttagaagctattcttaacttccagcagatgtcgatggactta
accggcctagatcttgcctcggcatccttactggatgaagcgagcgccggcgccgaagcc
atggcgctagcaaagcgtgtctctaaagccaaaaaagccaacatcttcttcgttgccgat
gacgtgttcccgcagaccttagatgtggtgcaaacccgcgccgaatgtttcggttttgaa
gtggtggtggggcctgccgccgatgccgttaactacgagctgtttggcgccttgttccaa
tactcgaaccgtcatggtcaaatcagtgatttcacagcgctatttagcgaacttcgcgct
aaaaacgtggtagtgacagtggcagcagatttgatggcgttaatgctacttaaatcacca
ggcgccatgggcgcagacgtggtcttcggtagtgcccagcgctttggcgtacctatgggg
tacggcggcccacacgcggcattcttcgtggcccgtgatgagcacaagcgttctatgcct
gggcgcattatcggtgtgtctaaagacacccgtggcaacatggcactgcgcatggcaatg
cagacgcgcgagcaacatattcgccgcgaaaaagccaactcaaacatttgtactgcgcag
attctattagccaacatggcctcgttctacgccgtattccatggcccacaaggccttaag
accatagcgacgcgcatcaatcgtctggcagatattttagcttttggccttaaagccaag
ggcctaagcctagtgaacgacgcttggtttgataccgtgtcggtgaaaggcgcagacatt
ggcgccattcaagcgcgcgccatcgcagctggcattaacttgcgcatcgatgccgatggc
gtgtttggcataagccttgatgaaaccacactgcgaagcgatatcgccgatttattcgat
gccattttaggcgcaggccatggcctagatgtggcggcaattgatgcacagcttgtggcg
gcgaacagcagctcaatcccagcggcattagtgcgaacagatgccgtattaactcatcca
acctttaatcgctaccagagcgaaaccgagatgatgcgttacatcaagcgccttgaaaac
aaagatttagccttgaaccattcgatgatatcactgggttcatgcaccatgaagcttaac
gctgccgtagaaatgctgccggtaagctggccagaatttgccaacatgcacccattctgc
ccgctagatcaagcagaaggttacactcagttaatcaatgaactgtctgaataccttgtg
aaaatcacaggatacgatgccgtgtgtatccagccaaactcgggcgcgcagggcgagtac
gcaggccttctggccattaagaaataccatgagtctcgcggcgatgcccatagggatatt
tgtttaatcccacaatctgctcacggtacaaacccagcgtcggctcagcttgctggcatg
aaagtcgtggtaaccgcctgtgataagcaaggtaacgtagatttagacgatttgcgcgct
aaggcaagcgagcttgccgatagcctgtcatgcatcatgatcacctatccttcgacccac
ggcgtgtatgaagaatccatccgtgaagtgtgtgacatagtccaccaatacggcggtcaa
gtgtacttagatggcgctaacatgaatgctcaggtgggcctaacgtcacctggctttatc
ggcgccgacgtatcgcatttgaacctacacaagacttttgctatcccgcacggcggcggt
ggtccaggcatgggcccaatcggggtgaaatctcatctggcgccctttgtcgccggccac
actgtggtaaaacctggccgcgaaagtgaccataacggcgcagtgtcggcagcgccttac
ggcagcgccagcatattgcccatcagctggatgtacatcaagctgctaggcaccaaaggc
attaagcagtcgactcaaaccgcgctattaaacgctaactatgtgatgaagaagctgtcg
gcgcattacccagtcttgtttactggccgcaacgatcgcgtcgctcacgagtgtattatc
gatttgcgcccactcaaagaagcctcaggcgtcaccgagatggatattgctaagcgcctt
aacgattacggcttccatgcgccaaccatgagtttccctgtggcaggcaccttgatgata
gagccaaccgagtctgaatctaaggttgaattagacagattcatcgaggccatggtgtcc
atacgcggcgaaatcgccaaggtggagtctggtgagtggccagtggacaacaacccactg
cacaatgcaccgcataccatggcggacattatggacccagagtttgattcacgtccttac
agccgtgaagtggcggtgttcccaagtgccgcggtgaaagccaataagttctggccaacg
gttaaccgtattgatgatgtatatggcgataggaatctgatgtgtagttgcgtccctttg
agtgattatgaataa
DBGET
integrated database retrieval system