Shewanella denitrificans: Sden_1505
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Entry
Sden_1505 CDS
T00344
Name
(GenBank) surface antigen (D15)
KO
K07278
translocation and assembly module TamA
Organism
sdn
Shewanella denitrificans
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdn02000
]
Sden_1505
Transporters [BR:
sdn02000
]
Other transporters
Pores ion channels [TC:
1
]
Sden_1505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA_TamA_1
POTRA
Motif
Other DBs
NCBI-ProteinID:
ABE54790
UniProt:
Q12P36
LinkDB
All DBs
Position
complement(1746729..1748570)
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AA seq
613 aa
AA seq
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MSPRLLLLCFWLILAPLVSFPAFGDNTWLSIKVTGVKGKLARNIRAHLGADPESDVQRRA
YLFTAEDNITAALESLGRYHSSVELTVIESDSEPWQLQIAVTPGEPTLVQWVDIQFSGEM
RSDDAFNLWLDSITLLPGDTLNHGRYLEIKSQLTTLALTRGYFDAEYTLAEIQVNRDLNS
ARISLHFDSGKRYQFDEVTFSGHSLDDDLLQTLVPFDADMPYASSQLSALHRNLLDSGYF
SSIKVLPQIDKIHDNLVPIKVELTDRNSHSFEVGVGADIGNTSEKSVEPRVRFTWRTPQI
NHLGHSQETSLEWSPDRPKFLTTYSIPLTHVLNDKLNIRLGLLRDKYGVTQDYLPTEKTF
ANTGQLESSKQLFGLVRQQKLDNQWLWSYSLEAVHEEYNQLNQDFNPKIYLLGMGFSRSL
RGDNSLDPKSGFRQIYHIEHADGSLGSSLSLTRLQSRFKWIDTLFDNHRFVARLDLAANL
ADTEDMANIPPSLRYFAGGDQSIRGYGYQELGPHIEYTNAEGGTSRQVVGGRYLAVASVE
YQYYLTPTWRLASFIDGGNAFDTKQFDPVLAVGSGVHWISPIGPIKLDLGVGLKETDTVA
RSWRIHLTMGTEL
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgtcccctcgtttattgttgctgtgtttttggctaatactggcccctttggtgtctttt
ccagcctttggtgacaacacttggttgagcattaaggtgactggagtcaagggcaagtta
gcccgtaatatccgcgctcatcttggcgccgatcctgaatccgatgtgcagcgccgagcc
tacctttttaccgcagaagataacatcaccgccgccctcgaatccttaggccgctaccat
agtagtgtggagctgacggttatcgaatcagactctgaaccttggcaactgcaaatagct
gttactccaggtgaacctaccttagtgcaatgggttgatatccaattcagtggtgagatg
cgcagcgatgatgcctttaatttgtggctcgatagcatcacattactgcccggagacaca
ctcaatcatggccgttatttggagattaaatctcaactcactaccttggctctcacccgt
ggctatttcgatgccgagtacaccctggctgaaattcaagtcaatcgtgatctcaatagt
gctagaatcagcctgcattttgattcaggtaagcgttatcaattcgatgaagtgaccttt
agcggccacagcctagatgatgatttactacaaacactcgtccccttcgacgccgacatg
ccctacgccagttcgcaactgtctgccctacacagaaacctgctggactcaggttatttc
agtagcattaaagtgctgccacaaattgataaaattcatgacaacttagtgcccatcaag
gtcgaactcacagacagaaacagccactcttttgaggtcggtgtgggtgcagacataggc
aacaccagtgaaaaaagcgtcgagcctagagtgagattcacctggcgcacaccgcaaatt
aatcacttgggtcacagtcaagaaaccagtttggagtggtctcctgacagacctaagttc
ttaaccacctattccatcccattaacccatgtgttgaacgataaactcaatatcaggcta
ggattactacgggataaatacggtgtcactcaggactacctacccacagagaaaaccttt
gctaacacaggccagcttgagtcaagcaagcaattgtttggcttagttaggcagcaaaag
cttgataatcagtggttgtggagttattcactcgaagcggttcatgaagaatataatcaa
ttaaatcaggacttcaacccaaaaatctacttacttgggatggggtttagccgcagtcta
cggggtgacaatagcttagaccctaaatcaggatttaggcagatttaccacatagagcat
gccgatgggagcttaggttccagcttaagtctcacccgcctgcagagccgtttcaagtgg
atagataccctatttgataaccacaggttcgttgccagactcgatttagccgccaacctt
gccgacactgaagacatggccaacataccgccatcattgcggtattttgccggtggcgat
cagagtattcgcggttatggctaccaagaactgggcccacatatcgaatacaccaatgca
gaaggcggaacctcccgccaagtggttggcggacgctacctcgcggtagcaagtgttgaa
tatcaatactacctgactcccacatggcgactggcaagctttatcgatggtggcaatgcc
ttcgataccaagcaatttgatcccgtgctggctgtgggtagtggtgtgcactggatttca
cctatcggccctatcaagctcgatttaggcgtcggcttaaaagaaaccgacactgtcgct
cgctcatggcgtattcatctcaccatgggaactgagctatga
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