Shewanella denitrificans: Sden_1567
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Entry
Sden_1567 CDS
T00344
Name
(GenBank) lipid-A-disaccharide synthase
KO
K00748
lipid-A-disaccharide synthase [EC:
2.4.1.182
]
Organism
sdn
Shewanella denitrificans
Pathway
sdn00540
Lipopolysaccharide biosynthesis
sdn01100
Metabolic pathways
Module
sdn_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
sdn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Sden_1567
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sdn01005
]
Sden_1567
Enzymes [BR:
sdn01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.182 lipid-A-disaccharide synthase
Sden_1567
Lipopolysaccharide biosynthesis proteins [BR:
sdn01005
]
Lipid A
Sden_1567
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxB
DeaD_dimer
Motif
Other DBs
NCBI-ProteinID:
ABE54852
UniProt:
Q12NX4
LinkDB
All DBs
Position
1820992..1822143
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AA seq
383 aa
AA seq
DB search
MRSQTSQIVFAMVAGEISGDILGAGLIKSLQKTHPNARFVGIGGPRMEALGFESFFALEE
LSVMGIVEVLSRLPRLIKVRSSLIEQIVAANPDCFIGIDAPDFNIGLELKLKAKGIKTVH
YVSPSVWAWRPKRIFKIAKATHMVLSLLPFEKAFYDQHQVPCTFVGHTLADDIPLESPKL
PARTLLGLDADAEYLAILPGSRKGELAQLSEPFIKAASLIKQACPDIKFVTPLVNEARRQ
EFLAALTQFDPDLEIELIDGQSREVMAAADGILLASGTATLEAMLVKRPMVVAYRVSPIT
YAIAKRMMSISHYSLPNLLAGTELVPELIQENCTPEKIASAVLAQLNGDFSATQARFLAL
HNQLNCHASDRAAEAVLKLIEQK
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgcgttctcaaacatctcaaattgtctttgccatggtcgccggagaaatctccggcgat
atattaggtgcaggcttaattaaatcacttcagaaaacccaccctaatgcgcgcttcgtc
ggcattggcggtccgcgaatggaagccttaggctttgaaagcttttttgcccttgaagaa
ttatctgtgatgggcatagtcgaagttttgtctcgcttacctaggcttatcaaggttcgc
agcagcttgattgaacaaattgttgccgctaatcctgattgctttatcggtatcgatgct
ccagatttcaatatcggtcttgagcttaagcttaaagccaaaggcatcaagactgtgcat
tacgtcagcccttcggtgtgggcatggcggcccaaacggattttcaaaattgctaaggcc
acccatatggtgttgtctttgttgccgtttgagaaagccttctacgaccagcatcaagtg
ccttgtaccttcgtgggtcatacattggccgatgatattcccctagagagccctaaattg
cctgcgcgcacgcttttggggttagatgctgatgctgaatatttagccattttgccaggt
tctcgtaaaggcgaattagcccagttgagtgagccatttatcaaggcggcaagcttgatt
aagcaagcctgcccagacattaaatttgttacgcctttagtgaatgaagcccgcagacaa
gagttccttgccgcgttaacgcagtttgatcccgatctggaaattgaacttatcgatggt
caatctcgagaagtcatggcggcagccgacggtattttattggcctcaggcacagcaacc
cttgaagccatgctggtgaagcgtcccatggtggtggcctatagggttagccctatcacg
tacgctatcgctaagcgcatgatgagcatcagtcattattcactgcctaacctgttagcg
ggcacagagttagtgcctgagcttattcaagaaaactgcacgccagagaaaatagcaagc
gctgtgctcgctcagttaaacggtgatttcagcgcgacacaggcgcgctttctagcactg
cataatcagcttaattgccatgccagtgacagagccgccgaggcggtgcttaagcttatt
gagcaaaaataa
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