Sphingomonas donggukensis: M9980_06440
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Entry
M9980_06440 CDS
T08944
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
sdon
Sphingomonas donggukensis
Pathway
sdon00190
Oxidative phosphorylation
sdon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sdon00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
M9980_06440
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M9980_06440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sdon03019
]
M9980_06440
Enzymes [BR:
sdon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
M9980_06440
Messenger RNA biogenesis [BR:
sdon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
M9980_06440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
GCFC
Mcm-like_N
Motif
Other DBs
NCBI-ProteinID:
URW76828
UniProt:
A0ABY4U2P5
LinkDB
All DBs
Position
complement(1312810..1314984)
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AA seq
724 aa
AA seq
DB search
MVSRPRPIDPEPAPPSDRPGRYFNRELSWLAFNRRVLEEACNPAHPLLERLRFLSISGSN
IDEFFMVRVAGLLGQQMQGVEYRSADGLTPGQQLAEIVKEADRLVDSQQAVWRDLTAALA
GEGITVLDERAIDDELATWLAQHFREQLFPILTPQALDPAHPFPFIPNAGLSVIFDLVRQ
SDGEPIRELVLLPPSIPRFVRVPGEAARFITMEGVLKRFSGLLFPGYEVKAAAAFRILRD
SDIELEEEAEDLVLYFRTAIKRRRRGRVIRLEMETGIGSELEQVLKGELGGAEAILTETG
GFLGLGDLAMLVDTDRPDLKFTPYSPRFPERIREFGGDCFAAIRAKDIVVHHPYESFDVV
LEFLKQAAADPDVIAIKQTLYRAGKQSAVVNALIAAAEAGKSVTAVVELKARFDEEQNLL
WASALERAGVQVVYGFIDWKTHAKVSVVVRREGGAYRSYCHFGTGNYHPVTARIYTDLSF
FTADPRIGRDAAAIFNYVTGYVEPGKLELLSISPRDLRNTLMTLIDVEIANAAAGKPAAV
WAKMNSLVDPAVIEKLYEASNAGVEIDLIVRGICCLRPGVPGMSERVRVKSVVGRFLEHS
RIWAFANGDVLPNDGAKVYISSADWMPRNFDRRVEFMLPILNETVHDQVLDQVMVASLID
TEQSWDLRSDGSYERVMPVEGQKDFNLHQYFMTNPSLSGRGAATAKRRKVPKLTVKARRR
GGAK
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggtgagccgtccccgcccgatcgatcccgagcccgccccgccgagcgatcggcccggg
cgctatttcaaccgggagctgtcgtggctggcgttcaaccggcgggtgttggaggaggcg
tgcaaccccgcacatccgctgctggagcggttgcggttcctgtcgatttcgggatcgaac
atcgacgaattcttcatggtgcgggtcgccggactgctcggccagcagatgcagggcgtc
gaatatcgctccgccgacgggctgacgccggggcagcagctggccgagatcgtgaaggag
gccgaccggctggtcgacagccagcaggcggtgtggcgcgacctgaccgcggcgctggcg
ggggaggggatcaccgtcctcgacgagcgcgcgatcgacgatgagctggcgacgtggctg
gcgcagcatttccgcgagcagctgttcccgatcctcactccacaggcgctggacccggcg
catccgtttcccttcatcccgaacgccggcctgagcgtcatcttcgacctggtgcgccag
tcggacggcgagccgatccgcgagctggtgctgctgccgccgagcatcccgcggttcgtg
cgggtgccgggggaggcggcccggttcatcacgatggagggcgtgctgaagcggttctcc
ggcctgttgttccccgggtacgaggtgaaggcggcggcggcgttccgcatcctgcgcgac
agcgacatcgagctggaggaggaggccgaggatctagtcctgtacttccgcaccgcgatc
aagcggcggcggcgggggcgggtgatccggctggagatggagaccggcatcggctccgag
ctggaacaggtgctgaagggggaactgggcggagccgaagcgatcctgaccgaaaccggc
ggcttcctggggctgggcgatctggctatgctggtcgataccgaccgccccgacctgaag
ttcacgccctattcgccgcgcttccccgagcgcatccgcgaattcggaggcgattgcttc
gcggcgatccgggcgaaggacatcgtcgtccaccacccgtacgagagcttcgacgtcgtc
ctggaattcctgaaacaggccgccgccgaccccgacgtcatcgccatcaagcagacgcta
taccgtgcgggcaagcagtcggcggtcgtcaatgcgctgatcgccgcggcggaggcgggc
aagtcggtgaccgcggtggtcgagctgaaggcgcggttcgacgaggaacagaatctgctg
tgggcctccgcgctggagcgggcgggcgtgcaggtggtgtacggcttcatcgactggaag
acgcacgccaaggtgtcggtggtggtgcggcgcgaggggggtgcgtaccgcagctactgc
catttcggcaccggcaactatcacccggtgacggcgcggatctacaccgacctcagcttc
ttcaccgccgatccgcggatcgggcgcgatgcggcggcgatcttcaactacgtcaccgga
tacgtggagcccggcaagctggagctgctctcgatctcgccgcgcgacctgcgcaacacg
ttgatgacgctgatcgacgtcgagatcgccaatgcggcggcgggcaagccggcggcggtg
tgggcgaagatgaattcgctggtcgatccggcggtgatcgagaaattgtacgaggcgtcg
aatgccggggtcgagatcgacctgatcgtgcgcggcatctgctgcctgcgtcccggcgtg
cccggcatgtcggagcgcgtccgcgtgaagtcggtagtcgggcgctttctggagcacagc
cggatctgggcgttcgcgaacggcgacgtgctgccgaacgatggcgcgaaggtctatatc
tcgtccgccgactggatgccgcgcaatttcgaccggcgggtcgaattcatgctgccgatc
ctgaacgaaaccgtccacgaccaggtgctggatcaggtcatggtcgccagcctgatcgat
accgagcagagctgggacttgcgcagcgacggcagctatgagcgggtgatgccggtcgag
ggccagaaggatttcaacctgcaccagtatttcatgaccaacccgtcgctgtcgggccgc
ggcgcggcgaccgccaaacggcgcaaggtacccaagctgacggtcaaggcccgccgccgc
ggcggcgccaagtga
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