Staphylococcus delphini: NCTC12225_00002
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Entry
NCTC12225_00002 CDS
T06587
Symbol
dnaN
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
sdp
Staphylococcus delphini
Pathway
sdp03030
DNA replication
sdp03430
Mismatch repair
sdp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sdp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC12225_00002 (dnaN)
03430 Mismatch repair
NCTC12225_00002 (dnaN)
03440 Homologous recombination
NCTC12225_00002 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sdp03032
]
NCTC12225_00002 (dnaN)
03400 DNA repair and recombination proteins [BR:
sdp03400
]
NCTC12225_00002 (dnaN)
Enzymes [BR:
sdp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC12225_00002 (dnaN)
DNA replication proteins [BR:
sdp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC12225_00002 (dnaN)
DNA repair and recombination proteins [BR:
sdp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC12225_00002 (dnaN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Hint_2
Motif
Other DBs
NCBI-ProteinID:
VED61456
LinkDB
All DBs
Position
1:1520..2650
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AA seq
376 aa
AA seq
DB search
MEFSIQRDYFITQLNDTLKAISPRATLPILTGIKIDATNEGIVLTGSDSEISIEITIPNQ
VDGQEIINVVEPGSVVLPGRFFVDIIKKLPGKEVRLSTNEQFQTLITSAHSEFNLSGLDP
DQYPLLPQVSSDDALQLPVKVLKNIIAQTNFAVSTSETRPVLTGVNWLIQQNELICTATD
SHRLAVRKLKLDEEIEDKNVIIPGKALAELNKIMTDSEDHIDIFFASNQVLFRVGNVNFI
SRLLEGHYPDTSRLFPENYEIKLGLNNSDFYHAIDRASLLAREGGNNVIKLSTGDTQIEL
SSTSPEIGTVKEEVTANDVEGGNLKISFNSKYMMDALKAIDNEEVEVEFFGTMKPFILKP
KDDDTVTQLILPIRTY
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggagttttctattcaaagagattattttatcactcaattaaatgacacattaaaagct
atttcaccaagagcaactttacccattttaacggggattaaaatagacgcgacgaatgaa
gggattgttttaacaggatctgattctgaaatctcaatcgaaattacaattcctaaccaa
gtcgatggtcaagaaattattaacgtggttgaacctggttcagtcgtgttaccaggccgc
ttctttgtagacattattaaaaaactaccaggtaaagaagttagactttcaacaaacgaa
caatttcaaacattaattacttcagcacattctgaattcaacctaagtggacttgatcca
gatcagtacccacttttaccacaagtttctagtgatgacgcactacaattaccagtaaaa
gtgctgaaaaacattattgcacaaacgaattttgcagtgtccacctcagaaacacgtcca
gtactgacaggtgtgaactggcttatacaacaaaatgaattaatatgcactgcgactgat
tcacaccgcttggctgtaagaaagttgaagcttgacgaagagattgaagataaaaatgtc
atcattcctggtaaagcattagcggagttaaacaaaattatgactgacagtgaagatcat
atcgatattttcttcgcatcgaaccaagttttatttagagtaggcaatgtcaactttatt
tcacgtttattagagggacattatccagatacatctcgtttattccctgaaaactacgaa
attaagttagggctcaataactctgatttttatcatgcgattgatcgtgcgtcattactt
gcgcgtgaaggtggcaacaatgtcatcaaattaagcacaggagatacgcaaattgaattg
tcttctacatcaccagagattggtaccgttaaagaagaagtgactgccaatgatgttgag
ggcggcaacttaaaaatttctttcaactcgaagtacatgatggatgcactcaaagccatt
gataacgaagaagttgaagtagaatttttcggtacgatgaaaccatttattttaaaaccg
aaagatgacgacactgtgacacaacttattttaccaatccgtacgtactaa
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