Staphylococcus delphini: NCTC12225_02707
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Entry
NCTC12225_02707 CDS
T06587
Symbol
gidA
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
sdp
Staphylococcus delphini
Brite
KEGG Orthology (KO) [BR:
sdp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sdp03016
]
NCTC12225_02707 (gidA)
03036 Chromosome and associated proteins [BR:
sdp03036
]
NCTC12225_02707 (gidA)
Transfer RNA biogenesis [BR:
sdp03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
NCTC12225_02707 (gidA)
Prokaryotic type
NCTC12225_02707 (gidA)
Chromosome and associated proteins [BR:
sdp03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
NCTC12225_02707 (gidA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
GIDA_C_1st
SAM_GIDA_C
FAD_binding_2
Pyr_redox_2
FAD_oxidored
Pyr_redox_3
DAO
GapR_DNA-bd
Motif
Other DBs
NCBI-ProteinID:
VED64029
LinkDB
All DBs
Position
1:complement(2793508..2795382)
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AA seq
624 aa
AA seq
DB search
MVKSFDVIVVGAGHSGIEAGLASARRGAHTLMLTINLDNIAFMPCNPSVGGPAKGIVVRE
IDALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRILEDEDNLEVMQ
GMVDELIIEDGKVKGVRTNIGTEYRAKAVILTTGTFLRGEIILGNLKYSSGPNHQLPSIT
LADHLRELGFEVVRFKTGTPPRVNAKTIDYSKTEIQPGDDVGRAFSYDTTEYILDQLPCW
LTYTNGETHQVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRN
TNEVYVQGLSTSLPEEVQRQILATIPGLEKADMMRAGYAIEYDALVPTQLWPTLETKMIK
NLYTAGQINGTSGYEEAAGQGLMAGINAAARVLGKEETILRRSDAYIGVLIDDLVTKGTN
EPYRLLTSRAEYRLLLRHDNADLRLTDLGHELGLISDERYERFNTKRQQITDEIARLEQI
RVKPSERVQQIIEEKGGSRLKDGILAKELLRRPEMTYETIIEILEEDHQLPADVEEQVEI
QTKYEGYITKSLQQVDKVKRMEQKKIPEDLDYSKIDSLATEAREKLAEVKPLNIAQASRI
SGVNPADISILLVYLEQGKIQRVK
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaatcattcgacgtgattgtagtaggcgctggacattccggtattgaagccgga
ctcgcatcagcgcgacgtggcgcacatacgctcatgctgacaatcaatttagataatatc
gcatttatgccatgtaacccatcagtagggggacctgcgaaagggattgtcgtacgtgaa
atcgatgcgctcggtggacaaatggcgaaaacaatcgataaaacacacattcaaatgcgt
atgttgaacacaggaaaagggccagctgtacgtgcattacgtgctcaagcagacaaagtg
ctgtatcaacaagaaatgaaacgtattttagaagatgaagataacttagaagtgatgcaa
ggaatggtagacgaactgattatcgaggacggaaaagtgaaaggtgtccgtacgaatatc
ggtacagaatatcgcgcaaaagccgttattttaacgacaggtacatttttacgtggtgaa
atcattctcggtaatttgaaatattcaagtggtccaaaccatcaattgccatcaatcaca
cttgcagatcatttacgtgaacttggatttgaagttgtgcgcttcaaaacaggcacacca
ccacgtgtgaacgcgaaaacaattgattatagtaaaaccgagattcaacctggtgatgat
gtgggtcgtgcattcagttatgatacgacagaatatattttagaccagctcccatgttgg
ttgacgtatacgaatggcgaaacacaccaagtgattgatgataacttgcatttatccgcg
atgtactcaggtatgattaaaggaacaggtccgcgttattgcccatccattgaagataaa
tttgtgcgttttaatgataagccaagacatcaacttttccttgaaccagaaggccgtaat
acaaatgaagtttacgtccaagggttgtcaacaagcttacctgaagaagtgcaacgtcaa
atattagcgacgattccaggtttagaaaaagcagacatgatgcgtgcaggttatgcgatt
gaatatgacgcactcgtcccaacacaattatggccaacgcttgaaacgaaaatgatcaaa
aatctttatacagcgggtcaaattaacggaacatcaggctatgaagaagcggcaggtcaa
ggtttaatggccggaattaatgcagcagcgcgtgtattaggtaaagaagaaacgatttta
cgccgttcagacgcgtacatcggtgtgttaattgatgaccttgtgacaaaaggaacgaat
gaaccgtatcgtttactgacatctcgtgccgaataccgtttgttattacgtcatgacaat
gcagatttacgtttaacagacttaggtcacgaattaggtttaatttctgatgaacgttac
gaaagatttaatacgaagcgtcaacaaatcactgatgaaattgcacgtttagaacaaatt
cgtgttaaaccgagcgaacgtgtacaacaaattattgaagaaaaaggcggttctcgtctt
aaagatggtattttggcgaaagaattgttacgtcgtccagaaatgacgtatgaaacgatt
attgagattttagaagaagaccatcaattgccggcagatgttgaagaacaagttgaaatt
caaacgaaatatgaaggttatatcacgaagtcattgcaacaagtagataaagtgaaacgt
atggaacagaagaaaattccggaagacttggattacagtaaaatcgacagtctcgcaacg
gaagcgcgtgaaaagttagctgaagtgaaaccgttaaacatcgcacaagcgtcacgtatt
tctggtgttaatccggccgatatttcgatcttattagtctacttagaacaaggcaaaatt
caaagggtgaaataa
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