KEGG   Sulfuricella denitrificans: SCD_n02088
Entry
SCD_n02088        CDS       T02857                                 
Symbol
nrdA
Name
(GenBank) ribonucleotide-diphosphate reductase subunit alpha
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
sdr  Sulfuricella denitrificans
Pathway
sdr00230  Purine metabolism
sdr00240  Pyrimidine metabolism
sdr01100  Metabolic pathways
sdr01232  Nucleotide metabolism
Module
sdr_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
sdr_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:sdr00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    SCD_n02088 (nrdA)
   00240 Pyrimidine metabolism
    SCD_n02088 (nrdA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sdr03400]
    SCD_n02088 (nrdA)
Enzymes [BR:sdr01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     SCD_n02088 (nrdA)
DNA repair and recombination proteins [BR:sdr03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    SCD_n02088 (nrdA)
SSDB
Motif
Pfam: Ribonuc_red_lgC ATP-cone Ribonuc_red_lgN
Other DBs
NCBI-ProteinID: BAN35899
UniProt: S6AM96
LinkDB
Position
complement(2131305..2134148)
AA seq 947 aa
MQLATDSVSPSPFAASNFGSGEAVTGTESLYTQYRIIRRNGSVVGFEPAKISIALTKAFI
AVNGGQGAASARVREVVAALTESVVSALMRRQPNGGTFHIEDIQDQVELALMRSGEHDVA
RSYVLYREQRTQERARQKLEQPAAAPHVINVIENGQTSPLDMAHLNALLQSACAGLGEAV
TPQPILEHTLRNLYDGVPIEEVGKAAILSARTLIEKEPAYSYVTARLLLDTIRKEVLGET
TSQANMETRYAEYFPDFIKQGIEAERLDERLAQFDLKRMGAALVASRDLQFGYLSLQTLY
DRYFLHIDERRIELPQAFFMRVAMGLSLNEIDRETRAIEFYNVLSSFDFMSSTPTLFNSG
TRRSQLSSCYLTTVSDDLDGIYEAIKENALLSKFAGGLGNDWSRVRALGSHIKGTNGKSQ
GVVPFLKVVNDTAVAVNQGGKRKGAVCAYLETWHLDIEEFMELRKNTGDDRRRTHDMNTC
NWIPDLFMKRVMEAGDWTLFSPNDVPDLHDLFGKAFEEAYTAYEAKAERGEIKLHKKVPA
LQLWRKMLTMLFETGHPWITFKDPCNIRSPQQHVGTVHSSNLCTEITLNTNEHEIAVCNL
GSVNLVAHLKDGVLDTAKLQRTVRTAMRMLDNVIDINYYAVAKARNANLKHRPVGMGIMG
FQDCLHALRVPYASQPAVEFADRSMEAVAYYAYMASTELAEERGRYATFTGSLWDRGILP
HESNALVKEARGGYLELDESVTLDWEALRARIQQFGMRNSNCLAIAPTATIANIVGVSAS
IEPTYQNLYVKSNLSGEFTVVNDYLVEDLKAAGLWDEVMISDLKYFDGTLAKIDRIPAEL
RQLYATAFEVDPSWLIEAAARRQKWIDQAQSLNIYIGSPSGKKLDETYKLAWLRGLKTTY
YLRSLGATHAEKSTSKAGALNAVPVDGGIVAETQFCSIDNPECEACQ
NT seq 2844 nt   +upstreamnt  +downstreamnt
atgcagcttgctaccgattccgtttcaccttccccttttgcagcatcgaacttcggttcc
ggcgaagccgtgacggggactgaatccctttatacccaataccggatcatccgccgtaac
ggctcggtggtcggtttcgagcccgccaaaatctcgattgcactgaccaaggcgttcatc
gctgtcaacggcggccagggcgcggcttctgcgcgtgttcgcgaggtcgtcgccgcgctg
accgagagcgtggtgtctgccctgatgcgccgccagcctaacggcggtacgttccatatc
gaagatatccaggaccaggtcgaactggcgctgatgcgctccggcgaacacgacgtcgcc
cgttcctacgtgctgtaccgcgagcagcgcacccaggagcgcgcccggcagaagctggag
cagcccgctgccgcgccgcatgtcatcaacgtcatagaaaatggccagacctccccgctc
gacatggcgcacctcaacgcgctgctgcaatcggcctgcgccggactgggcgaggccgtt
acgccgcagcctatcctcgaacataccctgaggaatctgtacgacggcgtgccgatcgag
gaagtgggcaaggcggccatcctctccgcccgtaccctgatcgagaaagaaccggcctac
agctacgtcaccgcgcgcctgctgctcgacaccatccgcaaggaagtgctgggcgagact
accagccaggccaacatggagacccgttacgccgagtatttccccgacttcatcaagcag
ggtatcgaagccgaacgcctcgacgagcgtctggcgcagttcgacctgaagcgcatgggc
gccgcactggtggcatcgcgtgacctgcagttcggctacctcagcctgcaaaccctgtac
gaccgctacttcctgcacatcgacgagcgccgcatcgagctgccgcaggcgttctttatg
cgtgtggcgatgggcctttcgctcaacgaaatcgaccgcgaaacccgcgccatcgagttc
tacaacgtgctctccagcttcgacttcatgagctcgacgccgaccctgttcaactccggt
acacgtcgctcgcagctttcttcctgctacctgaccacggtgagcgacgacctcgacggc
atctacgaggcgatcaaggaaaacgcgctgttgtccaagttcgccggcggcctcggcaac
gactggagccgggtgcgcgcgctgggcagccatatcaagggcaccaacggcaaatcccag
ggcgtggtgccgttcctgaaagtggtcaacgacaccgccgtggcggtgaaccagggcggc
aagcgcaagggcgcggtgtgcgcctacctggaaacatggcacctcgacattgaggaattc
atggagctgcgcaagaataccggcgacgaccgccgccgcacccacgacatgaatacctgc
aactggattccggacctgttcatgaagcgcgtgatggaagccggcgactggaccctgttc
agcccgaacgacgtgcccgacctgcacgacctgttcggcaaggcgttcgaagaggcttac
accgcctacgaagccaaggccgagcgcggcgagatcaagctgcacaagaaggttcccgcc
ctgcagctgtggcgcaagatgctcaccatgctgttcgaaaccggccatccctggatcacc
ttcaaggatccgtgcaacatccgcagcccgcagcagcatgtgggcacggtacacagctcc
aacctgtgcaccgagatcacgctcaacaccaacgagcacgaaatcgcggtgtgcaacctg
ggttcggtcaacctggtggcgcatctgaaagatggcgtgctcgacaccgccaagctgcag
cgcaccgtgcgcaccgcgatgcgcatgctcgacaacgtcatcgacatcaactactacgcc
gtggccaaggcgcgcaacgccaacctcaagcaccgcccggtaggcatgggcatcatgggc
ttccaggactgcctgcacgccctgcgcgtcccctacgccagccagcctgcggtcgagttc
gccgaccgcagcatggaagcggtggcctactacgcctacatggcttccaccgaactggcc
gaagagcgcggccgctacgctactttcaccggtagcctgtgggatcgcggcatcctgcca
cacgagtccaacgccctggtaaaagaggcgcgcggcggttatctggagctggacgagtcc
gtcaccctggactgggaagccctgcgcgcccgcatccagcagttcggcatgcgcaactcc
aactgcctggcgatcgcgccgaccgcgaccatcgccaacatcgtcggggtctccgccagc
atcgagccgacttaccagaacctgtacgtgaaatccaacctgtccggcgaattcaccgtg
gttaacgattacctagtggaagacctgaaagcggccgggctgtgggacgaagtgatgatc
tccgacctcaagtatttcgatggcacgctggccaagatcgaccgcatcccggccgaactg
cgccagctttacgccaccgccttcgaggtcgacccaagctggctgatcgaagccgccgcc
cgccgccagaagtggatcgatcaggcgcagagcctgaacatctacatcggctcgccgtcc
ggcaagaagctcgatgaaacctacaagctggcgtggctgcgtggcctcaagaccacctac
tacctgcgtagcctgggcgccacccacgccgagaaatccacctccaaggccggcgcactg
aacgccgtgccggtggacggcgggatagtggcggaaacccagttttgttcgattgacaat
cctgagtgtgaggcatgccaatga

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