Streptomyces drozdowiczii: NEH16_25900
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Entry
NEH16_25900 CDS
T09042
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
sdrz
Streptomyces drozdowiczii
Brite
KEGG Orthology (KO) [BR:
sdrz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
sdrz03051
]
NEH16_25900 (pafA)
Enzymes [BR:
sdrz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
NEH16_25900 (pafA)
Proteasome [BR:
sdrz03051
]
Prokaryotic proteasome
Bacterial regulatory particles
NEH16_25900 (pafA)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Ribosomal_L19
Motif
Other DBs
NCBI-ProteinID:
UZK57061
UniProt:
A0ABY6PYU5
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All DBs
Position
5694260..5695621
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AA seq
453 aa
AA seq
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MDRRIFGLENEYGVTCTFRGQRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGS
HPEYATPECDNLTELVTHDKSGERILEGLLVDAERRLHEEGIAGDVYLFKNNTDSAGNSY
GCHENYLVARHGEFSRLADILIPFLVTRQLICGAGKVLQTPRGAVYCVSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAERYRRLHVIVGDSNMSETTMLLKVGATDLVLRMIEAGTVM
RDLTLENPIRAIREVSHDTTGQRKVRLASGREASAIEVQREYYEKAVDFVDRRGIRTGNV
ERVLELWGRTLDAIEAEDLDRIDTEIDWVMKYKLIERYRAKHNMTMSNPRVAQIDLAYHD
IHRRRGLYYLLERKGQAARICNDLKIFEGKSVPPQTTRARLRGDFIRRAQEQRRDFTVDW
VHLKLNDQAQRTVLCKDPFRSVDDRVEKLIAGM
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggaccgccgcattttcgggctggagaacgagtacggcgtcacgtgcacgttcagggga
cagcgccgactgtctcctgatgaagtggcgcgctacctcttccgccgtgttgtgtcatgg
ggccgcagcagcaatgtctttctgcggaacggcgcccgcctctacctcgacgtgggatcg
catccggaatatgcaacccccgaatgcgacaacctgaccgagctggtcacccacgacaag
tccggcgagcgcattctcgagggcctgctcgtcgacgccgaacgccgcctgcacgaggag
ggaatcgccggcgacgtctatctcttcaagaacaacaccgactccgcgggaaactcctac
ggctgccacgagaactacctcgtcgcccggcacggggaattctcacgcctcgcggacatc
ctcattcccttcctcgtcaccaggcagctgatctgcggcgccggcaaggtgctccagacc
ccccggggcgcggtctactgcgtcagccagcgtgccgagcacatctgggagggcgtcagc
tccgcgacgacgcgctcccgcccgatcatcaacacccgcgacgaaccgcacgcggacgcg
gagcgctaccgccgcctccacgtcatcgtcggggactccaacatgtccgagacgaccatg
ctgctcaaggtcggcgcgaccgacctggtgctccgcatgatcgaggcgggcacggtgatg
cgcgacctgaccctggagaacccgatccgggcgatccgcgaggtcagccacgacaccacc
gggcagcgcaaggtccgcctcgccagtggccgggaggcttcggccatagaggtgcagcgc
gagtactacgagaaggccgtggacttcgtggaccgccgcggcatccgtacgggcaacgtc
gagcgcgtcctcgaactgtggggccgcacgctcgacgcgatcgaggccgaggacctcgac
cggatcgacaccgagatcgactgggtcatgaagtacaagctcatcgagcggtaccgggcc
aagcacaacatgaccatgtcgaatccgcgggtcgcccagatagacctcgcctaccacgac
atccaccgccggcgggggctgtactacctgctggagcgcaagggccaggccgcccgcatc
tgcaacgacctgaagatcttcgagggcaagtcggtgcccccgcagacgaccagggcgcgg
ctgcgcggcgacttcatccggcgggcccaggagcagcggcgggacttcaccgtcgactgg
gtccacctcaagctcaacgaccaggcgcagcgcacggtgctctgcaaggacccgttccgg
tcggtggacgaccgggtggagaagctgatcgcgggtatgtga
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