Seriola dumerili (greater amberjack): 111218672
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Entry
111218672 CDS
T05606
Symbol
tra2b
Name
(RefSeq) transformer-2 protein homolog beta isoform X1
KO
K12897
transformer-2 protein
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111218672 (tra2b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sdu01009
]
111218672 (tra2b)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sdu03041
]
111218672 (tra2b)
Protein phosphatases and associated proteins [BR:
sdu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111218672 (tra2b)
Spliceosome [BR:
sdu03041
]
Common components
Common spliceosomal components
SR proteins
111218672 (tra2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_10
Motif
Other DBs
NCBI-GeneID:
111218672
NCBI-ProteinID:
XP_022596804
LinkDB
All DBs
Position
Unknown
AA seq
280 aa
AA seq
DB search
MSDNDKGRESRSASRSVSPRGSGKSASRSPALSPARSKEGSRHSRSKSRSQSRSRSGSHS
RRGSRRHYSRSRSRSRSYHRRSHSRSYSGEHRRRSHSRSPMSNRRRHIGNRANPDPNCCL
GVFGLSLYTTERDLREVFSKYGPLADVSIVYDQQSRRSRGFAFVYFENTNDAKEAKERAN
GMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGGGGPSGPRRHSRDYDRGYDRGYDRGG
YDRYDDRDYYRSYRRRSPSPYYRGAYRSRSRSRSYSPRRY
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataacgacaaaggtcgggagtctcgctctgcgtccaggagcgtgagtccacgg
ggctcaggaaagtcggcaagccgctccccggctctctcaccagcccgttcaaaagaaggc
tcccgccactcccgttccaaatctcggtcccagtccaggtcaaggtctgggtcccattct
cgccgtggttcacgcagacactacagtcgatctcgttcccgctcaaggtcctatcatcgc
cgatcccatagcaggtcctacagtggagagcatcggcgcaggagccatagccgctcaccc
atgtccaatcgccgtaggcacatcggcaaccgtgcaaatccagacccaaactgctgcctg
ggagtgtttggcctgagcttgtacaccacagagagggatctgagggaggtgttctctaaa
tatggcccccttgctgatgtcagcatcgtgtatgaccagcagtcgaggcgctccaggggc
tttgcctttgtttacttcgaaaacacaaatgatgctaaagaggcaaaggaacgagccaat
ggcatggagctggatggtcgtaggatcagggtagacttctccatcacaaaaagacctcac
accccaacccctggaatctacatgggccgacccacatatggtggaggtggtcccagtggt
cctcgacgtcattcacgtgactacgaccgtgggtatgatcgcggatatgaccgaggcggc
tatgatcgctatgatgacagggactactacagatcatacagaaggcgatccccatcacca
tactacagaggagcttacaggtctcggtccagatcacggtcttattctccccgtcgctat
tga
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