Seriola dumerili (greater amberjack): 111219219
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Entry
111219219 CDS
T05606
Name
(RefSeq) dihydropyridine-sensitive L-type skeletal muscle calcium channel subunit alpha-1-like
KO
K04857
voltage-dependent calcium channel L type alpha-1S
Organism
sdu
Seriola dumerili (greater amberjack)
Pathway
sdu04010
MAPK signaling pathway
sdu04020
Calcium signaling pathway
sdu04260
Cardiac muscle contraction
sdu04261
Adrenergic signaling in cardiomyocytes
sdu04270
Vascular smooth muscle contraction
sdu04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
sdu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
111219219
04020 Calcium signaling pathway
111219219
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
111219219
09153 Circulatory system
04260 Cardiac muscle contraction
111219219
04261 Adrenergic signaling in cardiomyocytes
111219219
04270 Vascular smooth muscle contraction
111219219
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sdu04040
]
111219219
Ion channels [BR:
sdu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
111219219
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
CAC1F_C
Motif
Other DBs
NCBI-GeneID:
111219219
NCBI-ProteinID:
XP_022597553
LinkDB
All DBs
Position
Unknown
AA seq
1851 aa
AA seq
DB search
MAANGEAAKPVIMNEEELKRKQREKLKKLQATGGNPRPARSLFFFTLKNPFRKACINIVE
WKTFEIIILLTIFANCVALAVFLPMPEEDSNNTNLSLESLEYIFLIIFTLECFLKIVAYG
LVFHEGAYLRNCWNILDFVIVFMGLVTFVMDTVHKISGVPMEKGGGFDMKALRAFRVLRP
LRLVSGVPSLQVVMNSILKAMLPLLHIALLVFLLVTIYAIMGLELFKCKMHKTCYYTDTN
IYATAEGELPAPCAQAGNGRRCIINGSECRPGWEGPNNGITHFDNIGFAMLTVYQCITME
GWTKVLYWINDAMGNEWPWLYFVPLILLGSFFVLNLVLGVLSGEFTKEREKARSRGEFQK
LRERQQLDEDLHGYMEWITHAEVLDADREGKGLLPLTSGDSDTDSLYDLEGKSQIVFYYR
LARRWNRFFRMKCLVYVKTKSFYWAVMFLVFLNTLTIATEYHHQPDWLTSIQDVASRVLL
VLFVIEMFVKMYALGPRAYFMSLFNRFDFFVVLCGILEMIMLSAGAVAPLGFSVLRCIRL
LRILKVTKYWTSLSNLVASLLNSVRSIASLLLLLFLFIVIFSLLGMQVFGGKFNFPDHRP
RRSNFDNFPQALISVFQILTGEDWTSIMYNGIMAHGGPDFPGILVAIYFIILFVCGNYIL
LNVFLAIAVDNLAEAESLTSAQKEKAEEKLRRKLLRSKMPDKTDEERERIAKKLAEQRAK
MEGIPTTAKLKVDEFESNVNEVKDPFPPADFPGDDEEEEPEIPISPRPRPMADLQLKEEA
VPLPEASSFFIFGPQNKFRKLCYKIINASSFTNLILLFILLSSISLAAEDPIDPKSYRNQ
ILAYADIVFTTVFTIEIVLKMTVYGAFMHEGSFCRNSFNILDLIVVGVSLLSMGMESSAI
SVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIKTIGNIVLVTMLLNFMFACIGVQLF
KGKFYSCTDVSKLTGEECQGSFLKHMENSLQDTVVAKREWLNSDFNFDNVLYGMLALFTV
STFEGWPKLLYRAIDSDEEDMGPVFNNRVDVSIFFIIYIILIAFFMMNIFVGFVIVTFQE
QGEQEYQDCELDKNQRQCVQYALKARPLRCYIPKNPYQYRVWYIVTSSYFEYLMFFLIML
NTLCLGMQHCNQSDHVTKLSDMLNLIFTVLFTVEMILKLMAFKARGYFGDPWNVFDFIIV
IGSVVDVILSEVDTALASSGGLYCLHGCAETDPMQAIAASENASVSITFFRLFRVMRLVK
LLNRSEGIRNLLWTFIKSFQALPHVALLIVMLFFIYAVIGMQIFGKVALVDGTQINRNNN
FQTFPQAVLMLFRCATGEAWQEVMMASMYGKKCDPKSDFLPGEEHTCGSNFAVFYFLSFY
CLCAFLILNLFVAVIMDNFDYLTRDWSLLGPHHLDEFKKIWAEYDPEATGRIKHLDVVTL
LRRIQPPLGFGKFCPHRAACKRLVGMNMPLNSDGTVTFNATLFSLVRTALKIKTEGNFEQ
ANEELRAIIKKIWKRTSMKLLDQVIPPIGDDEVTVGKFYATFLLQDHLRKFLKTQEEYYG
YRPSKKNASGPEIQAGLRSIEEEAAPEMHRAISGDLQNEDEMDRAMEEAGEERIYQRTHG
LFGDRVDSFSTEPANAQSPHMTNQRPLKFSESQPESPPNSATLLPTTEFFPTTTPKNNTN
NNAFAEFSYEREGSPEEFYNPGEDAEPDNRRWSFTVKTDKTQFPYDPNYGDSQSQSSHTA
ADQLVQEALVEGGLASLSKDAGFVSATKKEMADAMQIPIAQMEGMAQGILNERSGSRASI
KKKRPIPVPPSGPSAAAQETVQPDPAVAPPHLTLPSSFPGDNLYLQAWLKA
NT seq
5556 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaacggcgaggcggccaagccggtcatcatgaatgaagaggagctgaagagg
aagcaaagggagaagctgaagaagctacaggccacggggggtaaccctcgacccgcgaga
tccctcttcttcttcaccctcaagaaccccttccgcaaggcctgcatcaatatcgtagag
tggaaaacctttgagatcatcattctattgaccatctttgcaaactgtgttgctctggct
gtgttcctgcccatgcctgaagaagacagtaacaacaccaacttgagcttggagagtttg
gagtacatcttcctgataatcttcacgttagagtgctttctgaagatagtggcgtatggg
cttgttttccatgaaggcgcctatttacggaactgttggaacatactggactttgtcatc
gtcttcatgggccttgtcacctttgtcatggatacagtccataagatatctggtgtgcca
atggagaagggaggggggtttgacatgaaggcactgagagccttcagagtgctacgaccc
cttcgcctcgtctctggagtccccagcctgcaggtggtgatgaactccatcctcaaggcc
atgctgcctctgctgcacatcgccctgctggtcttcttactggtcaccatctacgccatc
atgggactggagctcttcaagtgcaaaatgcataagacctgctattacaccgacacaaat
atctatgctacagcagagggcgagctgcctgctccctgtgctcaggctggtaacggacgc
cgttgcatcatcaacggctctgagtgtcggccaggctgggaaggtcccaacaatggcatt
acccacttcgataacatcggctttgccatgctgactgtctatcagtgtatcaccatggag
gggtggaccaaagtgctctactggattaatgatgccatgggaaatgagtggccctggctc
tactttgttcccctcattctgctgggctccttctttgtgctcaatctggtcctgggtgtg
ctcagtggagagtttaccaaagagagagagaaggcgaggtcgcgtggagagtttcagaag
ttgcgagagcgtcagcagctggatgaagacctccatggctacatggagtggatcactcac
gctgaagtcctggatgccgaccgagagggcaaaggattgctgcctttgaccagtggagat
tctgacacagacagcctgtatgacctggagggcaagagtcaaatcgtcttctactaccgt
ctggcccgtcgctggaatcgcttcttcaggatgaagtgcctggtttatgtgaaaacaaaa
agcttttactgggctgtgatgttcctcgttttcctcaacaccttgaccatagcaacagag
tatcaccaccagcctgactggctcacttccatacaagatgttgccagtcgtgtactgctg
gtgctgtttgtcattgagatgtttgtgaagatgtatgctctcggtcctagagcatatttc
atgtctctgtttaaccgctttgacttctttgtggtgctatgcggtatcctggagatgatc
atgctgtctgcaggagccgtggctcctctgggtttctctgtactcaggtgtattcggctg
ctgaggatcctcaaagtcacaaagtattggacctctctaagtaatcttgtggcctccctc
ctcaactctgtccgctccatcgcctccctgctcctccttctcttcctcttcatcgtcatc
ttctcgctcctcggcatgcaggtttttggggggaaatttaactttcccgaccacagaccc
agacgcagtaactttgacaacttccctcaggccctcatcagtgtatttcagatcctaaca
ggagaggactggaccagcatcatgtataacggcattatggctcatggagggcctgatttc
cctggcatcctagtcgccatctactttatcatcctctttgtctgtggaaactatatcctc
ctcaatgtcttcttggccatcgccgtcgacaacctggcagaggcggagagtctgacttca
gctcagaaagaaaaggcagaagagaagttgagaaggaagctgctaaggtccaaaatgcct
gacaagactgatgaggagagggagaggatagctaagaaactggcagagcagagggccaag
atggagggaattcccaccacagccaagcttaaagttgatgagtttgagtccaatgtcaat
gaagtgaaagatccgttcccacctgccgactttccaggtgatgacgaggaggaagagcct
gaaatcccgatcagccctcggcccagaccaatggccgacctgcagctgaaggaagaagcg
gttccattgcctgaagccagctccttcttcatctttggccctcagaacaagttccgaaag
ctgtgctacaagatcatcaatgcttcatccttcaccaacttaatcctcctgttcatcctg
ctctcctccatctccctggcagccgaggaccccatcgatcccaagtcctacagaaaccag
atcctggcctatgctgacattgtctttacaactgtcttcaccattgagattgtactaaag
atgacagtgtatggagcgtttatgcacgaaggctccttctgccgtaactccttcaacatc
ctggatctgattgtggtcggagtctccctgctttctatgggaatggaatccagtgccatc
tctgtggtgaagattctcagggtgttgagggtgctgaggcctcttagggccatcaacaga
gcgaaagggttaaagcatgtggtccagtgtgtgttcgtggccatcaaaaccatcggcaac
atcgtcctggtcaccatgctgctgaatttcatgtttgcctgtataggagtgcaactcttt
aagggtaaattctacagctgcacagacgtgtccaaactgactggggaggaatgccaggga
tccttcctgaagcacatggagaattccctacaagacaccgtggtggctaagagagaatgg
ctcaacagtgacttcaactttgacaatgtgctctatggcatgctggctctcttcactgtt
tccacatttgagggctggccaaaactcttatacagagccatcgattcagatgaagaggac
atgggtcctgtcttcaacaaccgtgtggacgtgtccatcttcttcatcatctacatcatc
ctcattgccttcttcatgatgaacatctttgtgggctttgtcatcgtcactttccaggag
caaggcgagcaggagtatcaggactgtgagctggacaagaaccagcgtcaatgtgtgcag
tacgccctgaaggctcgtcctctgagatgctacatccccaaaaacccctaccagtacagg
gtctggtacattgtcacctcctcctactttgagtacctcatgttcttcctcattatgctc
aacaccttgtgtctggggatgcagcactgtaaccagtcggaccatgtgaccaagctgtca
gacatgctgaacttgatcttcaccgtgctcttcaccgtggagatgattctcaagctcatg
gccttcaaagcgaggggctactttggagacccctggaacgtctttgatttcattatcgtc
attggcagcgttgttgatgtgatcttgagcgaagtcgataccgccctggcctccagtgga
ggactgtactgtcttcatggctgtgctgagacagatcctatgcaagcaattgcggcctcg
gaaaatgcttccgtttccatcacgttcttccgactcttccgtgtcatgcgtctggtcaaa
ctgctgaaccgttcggagggcatccgtaacctgctgtggacgttcatcaagtccttccag
gctctccctcacgtagctctgctcatcgtgatgctcttctttatctacgctgtcatcggg
atgcagatctttggaaaggtagccttagtggacggcactcaaatcaaccgcaacaacaac
ttccagacattccctcaggctgttctgatgttattccgatgtgctactggtgaggcgtgg
caggaggtcatgatggcttcgatgtacggaaagaagtgtgaccccaagtctgacttcctg
ccaggagaggagcacacctgtgggtccaacttcgctgtcttctacttcctcagcttctac
tgtctctgcgccttcctgatcctcaacctgtttgtagctgtcatcatggacaactttgac
tacctgacccgtgattggtctctcctcggcccccatcatctggatgagtttaagaagatc
tgggctgaatatgaccctgaagccacggggagaattaaacatctggatgtggtgacgctg
ctgcgacgcatccagcctccgttgggcttcggcaagttctgtcctcatcgtgctgcgtgt
aagcgtttggttggtatgaacatgcctctcaacagcgacggcaccgtcaccttcaatgcc
accctgttctctctggtcaggactgctctcaagatcaaaacagaaggtaactttgagcag
gccaatgaggagctgagagccattataaagaaaatctggaaacgcaccagtatgaaactg
ctagaccaggtcatccccccgataggagatgatgaggtgaccgtggggaaattctacgcc
accttcctgcttcaggaccatttacgcaagttcttgaagactcaggaggagtactacgga
taccggccctcaaagaaaaacgcctcaggcccggagatccaggcgggtctgaggagcata
gaagaagaggccgctccagagatgcacagggccatttcaggagacctgcagaatgaggac
gagatggacagagcgatggaggaggctggagaagagagaatttaccagcgtactcacggc
ctgttcggcgaccgggtggactcattctccactgagcccgccaacgctcagtccccacat
atgaccaaccagcggcccctcaagttctctgagagccagcccgagtccccgcccaactcc
gctaccttgttgcccactaccgaatttttccccacaaccacaccgaagaacaacactaac
aacaacgccttcgcagaattttcatatgaaagagaaggcagtcctgaagagttttacaat
cctggtgaggacgcagagccagacaacaggcgctggagcttcacagtgaaaacagacaaa
acgcagttcccttatgatcctaactatggtgacagtcagagccagagctcccacactgca
gctgatcagctcgttcaggaggctctagtagaaggcggtctagcctccctgtccaaagat
gcaggctttgtgtctgcaactaagaaggagatggctgatgccatgcagatccccatcgct
cagatggagggcatggcgcagggcatcctcaacgaacgctccggcagccgcgcctccatc
aaaaagaaacgtcccatccctgtccctccttccggcccatctgcggccgcacaggaaaca
gtccagccagatccggctgtggctccacctcacctcactttaccaagctcgttccccggt
gacaatctgtatctacaagcctggctcaaggcctaa
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integrated database retrieval system
